SSDB Paralog Search Result

KEGG ID :avi:Avi_8017 (893 a.a.)
Definition:ATP-dependent DNA ligase; K01971 DNA ligase (ATP)
Update status:T00851 (aso,ass,bcor,bmyc,btx,caj,caq,cii,cuv,eaa,eao,ete,fpc,gst,mcr,mjh,ngg,oah,palk,rat,rbt,sbv,sxy : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 22 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
avi:Avi_8275 ATP-dependent DNA ligase                               383    2483     572    0.981    372     
avi:Avi_6007 ATP-dependent DNA ligase                    K01971     539     202      52    0.280    243     
avi:Avi_3752 hypothetical protein                                  1114     133      36    0.234    576     
avi:Avi_0910 ribosomal large subunit pseudouridine synt  K06178     704     117      33    0.240    551     
avi:Avi_6133 ftsK cell division protein                  K03466     954     117      33    0.238    252     
avi:Avi_5982 tonB protein                                K03832     317     114      32    0.337    86      
avi:Avi_0474 succinyl-diaminopimelate desuccinylase      K01439     404     112      31    0.249    169     
avi:Avi_1474 hypothetical protein                                   663     111      31    0.215    520     
avi:Avi_1495 glycosyltransferase                                    632     109      31    0.240    146     
avi:Avi_0171 tRNA pseudouridine synthase B               K03177     309     108      30    0.207    323     
avi:Avi_1756 DNA topoisomerase I                         K03168     904     108      30    0.328    122     
avi:Avi_3047 hypothetical protein                                   517     108      30    0.240    358     
avi:Avi_2882 cell division protein FtsZ                  K03531     619     106      30    0.214    159     
avi:Avi_4295 Sun protein                                 K03500     493     104      30    0.224    468     
avi:Avi_2226 DNA topoisomerase IV subunit B              K02622     702     103      29    0.216    259     
avi:Avi_4313 methyl-accepting chemotaxis protein         K03406     642     103      29    0.296    81      
avi:Avi_7311 peptide synthetase                                    2183     103      29    0.214    383     
avi:Avi_9228 hypothetical protein                                   504     103      29    0.236    276     
avi:Avi_1549 ABC transporter ATPase                      K06158     639     102      29    0.279    190     
avi:Avi_4301 hypothetical protein                        K09798     398     102      29    0.258    178     
avi:Avi_3922 penicillin-binding protein                  K05367     695     100      29    0.246    325     
avi:Avi_5046 ABC transporter substrate binding protein   K02058     320     100      29    0.220    127     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]