SSDB Paralog Search Result

KEGG ID :bcv:Bcav_0272 (512 a.a.)
Definition:ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP)
Update status:T00893 (abaa,abau,abk,abw,babr,bamy,banh,bhm,blx,bmee,bsui,bthe,bthm,cbz,cdo,cfx,cgj,cgq,cjv,cmg,cmm,cun,cuq,cus,echp,echv,echw,ecla,eclc,fpq,frf,kom,kph,kpk,kpq,kpz,law,lia,lii,lio,may,mbz,mcat,mfc,mhom,mie,msn,ngi,npn,ocu,paea,paee,paeh,paej,ppnm,pstt,pstu,psw,sagc,smer,smia,smub,stax,sthe,syj,tki,vcq,zmc : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 78 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
bcv:Bcav_0653 ATP-dependent DNA ligase                   K01971     816     383      93    0.301    428     
bcv:Bcav_0480 ATP-dependent DNA ligase                   K01971     371     303      75    0.303    323     
bcv:Bcav_3097 SARP family transcriptional regulator                 915     162      43    0.294    439     
bcv:Bcav_3707 chaperone DnaJ domain-containing protein   K03686     337     159      42    0.275    345     
bcv:Bcav_4011 protoporphyrinogen oxidase (EC:1.3.3.4)    K00231     504     159      42    0.291    430     
bcv:Bcav_2056 hypothetical protein                                  502     156      41    0.267    449     
bcv:Bcav_3480 endonuclease/exonuclease/phosphatase                  276     154      41    0.281    210     
bcv:Bcav_3965 hypothetical protein                       K00627     511     154      41    0.295    342     
bcv:Bcav_2636 phosphoenolpyruvate-protein phosphotransf  K08483     522     153      41    0.272    386     
bcv:Bcav_3306 xylulokinase                               K00854     479     152      40    0.306    281     
bcv:Bcav_3537 1-phosphofructokinase (EC:2.7.1.144)       K00917     331     151      40    0.279    308     
bcv:Bcav_1945 P-type HAD superfamily ATPase              K01552     799     138      37    0.311    190     
bcv:Bcav_1547 dihydroxyacetone kinase (EC:2.7.1.29)      K00863     585     137      37    0.303    277     
bcv:Bcav_2453 DEAD/DEAH box helicase                     K03724    1668     137      37    0.301    292     
bcv:Bcav_3332 major facilitator superfamily protein                 515     137      37    0.300    230     
bcv:Bcav_0618 hypothetical protein                                  345     134      36    0.300    283     
bcv:Bcav_1487 phosphopyruvate hydratase (EC:4.2.1.11)    K01689     431     134      36    0.322    230     
bcv:Bcav_3185 phosphonate catabolism associated alcohol             367     134      36    0.323    279     
bcv:Bcav_1284 transcription termination factor Rho       K03628     645     131      36    0.322    174     
bcv:Bcav_0369 BadF/BadG/BcrA/BcrD type ATPase                       340     129      35    0.312    202     
bcv:Bcav_2645 TetR family transcriptional regulator                 526     128      35    0.300    307     
bcv:Bcav_2700 short-chain dehydrogenase/reductase SDR               268     127      35    0.302    232     
bcv:Bcav_0385 adenylate/guanylate cyclase                          1198     126      35    0.309    207     
bcv:Bcav_1725 NADPH-dependent FMN reductase              K00299     206     124      34    0.307    192     
bcv:Bcav_2795 cobalamin (vitamin B12) biosynthesis CbiX             246     121      33    0.326    230     
bcv:Bcav_0357 hypothetical protein                                 1208     120      33    0.309    152     
bcv:Bcav_3056 MerR family transcriptional regulator                 344     117      33    0.320    222     
bcv:Bcav_3398 glycoside hydrolase family protein         K12308     837     116      32    0.311    267     
bcv:Bcav_0111 aminoglycoside phosphotransferase                     316     115      32    0.304    191     
bcv:Bcav_2345 NmrA family protein                                   268     114      32    0.300    277     
bcv:Bcav_2450 histidine kinase                                      432     114      32    0.307    179     
bcv:Bcav_2802 major facilitator superfamily protein      K02575     476     114      32    0.354    127     
bcv:Bcav_0356 hypothetical protein                                 1624     113      32    0.321    134     
bcv:Bcav_1664 molybdopterin binding oxidoreductase                  524     113      32    0.372    199     
bcv:Bcav_2024 hypothetical protein                                  274     113      32    0.302    222     
bcv:Bcav_3736 HNH nuclease                                          661     113      32    0.308    266     
bcv:Bcav_0926 FAD linked oxidase domain-containing prot             764     112      31    0.350    157     
bcv:Bcav_3026 ATP-dependent DNA helicase PcrA            K03657     829     112      31    0.304    283     
bcv:Bcav_2720 LacI family transcriptional regulator (EC  K02529     337     111      31    0.305    243     
bcv:Bcav_3233 isochorismate synthase                     K02552     433     111      31    0.305    239     
bcv:Bcav_0788 dihydrodipicolinate synthetase             K01707     306     110      31    0.302    162     
bcv:Bcav_1563 MerR family transcriptional regulator                 234     110      31    0.301    176     
bcv:Bcav_1756 FHA domain-containing protein                         564     110      31    0.307    231     
bcv:Bcav_1039 NAD-dependent epimerase/dehydratase                   310     109      31    0.306    232     
bcv:Bcav_1444 helicase                                              885     109      31    0.308    159     
bcv:Bcav_1759 fibronectin type III domain-containing pr            2067     109      31    0.301    166     
bcv:Bcav_0043 ROK family protein                                    421     108      30    0.300    233     
bcv:Bcav_0232 hypothetical protein                                  417     108      30    0.335    161     
bcv:Bcav_0772 lipoprotein                                           160     108      30    0.326    129     
bcv:Bcav_1689 hypothetical protein                       K07141     225     108      30    0.324    216     
bcv:Bcav_0816 malate:quinone oxidoreductase (EC:1.1.5.4  K00116     496     107      30    0.306    108     
bcv:Bcav_0905 molybdenum cofactor synthesis domain-cont  K03750     404     107      30    0.342    158     
bcv:Bcav_1587 histidine kinase                           K07778     439     107      30    0.300    217     
bcv:Bcav_3824 hypothetical protein                                  417     107      30    0.304    191     
bcv:Bcav_4044 glycoside hydrolase family 3               K05349     874     107      30    0.319    163     
bcv:Bcav_0872 transcriptional regulator TrmB                        242     106      30    0.310    226     
bcv:Bcav_1961 acetyl-CoA acetyltransferase (EC:2.3.1.16  K00632     405     106      30    0.300    227     
bcv:Bcav_0027 serine/threonine protein kinase            K08884     473     105      30    0.315    168     
bcv:Bcav_0399 ECF subfamily RNA polymerase sigma-24 sub  K03088     300     105      30    0.305    197     
bcv:Bcav_1993 Holliday junction DNA helicase RuvA        K03550     200     105      30    0.319    182     
bcv:Bcav_2023 cytochrome P450                                       258     105      30    0.300    200     
bcv:Bcav_0113 polysaccharide deacetylase                            503     104      30    0.333    117     
bcv:Bcav_1340 tryptophanyl-tRNA synthetase               K01867     410     104      30    0.307    238     
bcv:Bcav_3267 alpha/beta hydrolase fold protein                     277     103      29    0.309    110     
bcv:Bcav_0287 histidine kinase dimerisation and phospho  K07778     370     102      29    0.315    165     
bcv:Bcav_0481 ABC transporter                            K01992     267     102      29    0.303    188     
bcv:Bcav_0904 5-formyltetrahydrofolate cyclo-ligase                 208     102      29    0.320    150     
bcv:Bcav_3108 short-chain dehydrogenase/reductase SDR               304     102      29    0.306    85      
bcv:Bcav_3241 regulator                                             186     102      29    0.307    163     
bcv:Bcav_0427 NADPH-dependent FMN reductase              K00299     184     101      29    0.333    102     
bcv:Bcav_0869 hypothetical protein                                  508     101      29    0.307    238     
bcv:Bcav_3037 group 1 glycosyl transferase                          386     101      29    0.343    175     
bcv:Bcav_0694 NLP/P60 protein                                       453     100      29    0.300    150     
bcv:Bcav_2483 histidine kinase                                      401     100      29    0.301    163     
bcv:Bcav_2563 dihydroxyacetone kinase subunit DhaL       K05879     221     100      29    0.345    119     
bcv:Bcav_3192 hypothetical protein                                  615     100      29    0.313    147     
bcv:Bcav_3279 DNA repair protein RadA (EC:2.1.1.63)      K04485     478     100      29    0.305    154     
bcv:Bcav_3600 phosphoribosylamine/glycine ligase (EC:6.  K01945     433     100      29    0.323    130     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]