SSDB Paralog Search Result

KEGG ID :bph:Bphy_0981 (954 a.a.)
Definition:DNA ligase D; K01971 DNA ligase (ATP)
Update status:T00704 (aal,ahp,ahr,asg,ble,bmet,bvt,cmn,cmo,ctes,dja,echj,echl,echs,elv,hcs,hct,hym,lfp,mcs,mdm,ngl,nvn,patr,pch,pmum,ppac,puf,rbc,rla,slv,tap,tcm,vir : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 40 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
bph:Bphy_4772 DNA ligase D                                          651    2082     480    0.479    672     
bph:Bphy_7582 DNA ligase D                                          651    2056     475    0.470    670     
bph:Bphy_1855 ATP dependent DNA ligase                              205     325      80    0.361    191     
bph:Bphy_4680 ATP-dependent DNA ligase                   K01971     561     160      42    0.267    374     
bph:Bphy_2384 L-carnitine dehydratase/bile acid-inducib             832     141      38    0.254    189     
bph:Bphy_4976 hypothetical protein                                  812     122      34    0.229    436     
bph:Bphy_1389 HhH-GPD family protein                     K01247     340     121      33    0.240    175     
bph:Bphy_4317 hypothetical protein                                  470     119      33    0.237    431     
bph:Bphy_5661 molybdopterin oxidoreductase               K00380    1400     119      33    0.216    485     
bph:Bphy_2974 CheA signal transduction histidine kinase  K03407     772     117      33    0.256    254     
bph:Bphy_4392 trehalose synthase                         K05343    1152     117      33    0.221    399     
bph:Bphy_4505 extracellular solute-binding protein       K15580     538     117      33    0.242    211     
bph:Bphy_1960 patatin                                    K07001     417     116      32    0.257    362     
bph:Bphy_6668 glucose-methanol-choline oxidoreductase    K16873     576     115      32    0.330    91      
bph:Bphy_6013 CoA-binding domain-containing protein                 895     112      31    0.240    317     
bph:Bphy_7448 cyclic nucleotide-binding protein          K00852     314     112      31    0.270    174     
bph:Bphy_4067 chromosome segregation ATPase-like protei            1033     111      31    0.220    296     
bph:Bphy_5460 RND family efflux transporter MFP subunit             337     111      31    0.239    259     
bph:Bphy_0818 ribonuclease                               K08300    1092     109      31    0.248    322     
bph:Bphy_7214 molybdopterin binding aldehyde oxidase an  K07303     730     109      31    0.320    175     
bph:Bphy_4155 hypothetical protein                                  401     108      30    0.263    262     
bph:Bphy_4535 3-(3-hydroxyphenyl)propionate hydroxylase  K05712     615     108      30    0.223    211     
bph:Bphy_1045 TatD family hydrolase                      K03424     263     106      30    0.244    172     
bph:Bphy_5217 putative GTP-binding protein                          878     106      30    0.266    259     
bph:Bphy_7283 hypothetical protein                                  361     106      30    0.419    62      
bph:Bphy_2022 acetolactate synthase 3 catalytic subunit  K01652     585     105      30    0.208    625     
bph:Bphy_3513 monooxygenase FAD-binding                  K05712     587     105      30    0.228    101     
bph:Bphy_4138 squalene-associated FAD-dependent desatur             425     105      30    0.232    380     
bph:Bphy_5976 hypothetical protein                                  595     105      30    0.248    161     
bph:Bphy_6250 RND family efflux transporter MFP subunit  K02005     388     105      30    0.231    234     
bph:Bphy_1341 RNA-binding S4 domain-containing protein   K06182     624     104      30    0.295    132     
bph:Bphy_7323 hypothetical protein                                  367     103      29    0.453    64      
bph:Bphy_0951 DNA polymerase III subunits gamma and tau  K02343     793     102      29    0.217    414     
bph:Bphy_4039 amino acid adenylation domain-containing             3224     102      29    0.236    258     
bph:Bphy_7151 hypothetical protein                                  132     102      29    0.290    93      
bph:Bphy_0295 phosphoenolpyruvate-protein phosphotransf  K08483..   861     101      29    0.202    416     
bph:Bphy_6327 pyridoxal 4-dehydrogenase (EC:1.1.1.107)   K00064     338     101      29    0.259    220     
bph:Bphy_7588 DNA helicase related protein                         2204     101      29    0.256    313     
bph:Bphy_6425 elongation factor G                        K02355     681     100      29    0.235    289     
bph:Bphy_7521 hypothetical protein                                  522     100      29    0.205    288     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]