SSDB Paralog Search Result

KEGG ID :bxe:Bxe_A2328 (1001 a.a.)
Definition:ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD
Update status:T00340 (agl,aoa,asq,avu,bcig,bgy,bhu,boe,btho,caby,hhsr,hsi,jaz,jeu,kba,mbf,myz,pmuc,suam,vhl,xho : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Threshold:
  

Search Result : 12 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
bxe:Bxe_B1315 DNA ligase (ATP)                          K10747     558      177 (    -)      46    0.251    387      -> 
bxe:Bxe_A0525 Putative histone H1-like protein                     205      160 (    -)      42    0.309    136      -> 
bxe:Bxe_A2372 Putative DNA uptake protein, ComEA-like p K02237     201      154 (    -)      41    0.292    154      -> 
bxe:Bxe_B0784 putative histone-like protein                        232      130 (    -)      35    0.361    119      -> 
bxe:Bxe_B2876 Putative membrane protein                 K03749     312      120 (    -)      33    0.305    118      -> 
bxe:Bxe_B0776 putative membrane glycoprotein                       655      116 (    -)      32    0.312    112      -> 
bxe:Bxe_A2575 hypothetical protein                                 154      111 (    -)      31    0.333    84       -> 
bxe:Bxe_A4399 rod shape-determining protein MreC        K03570     369      107 (    -)      30    0.310    113      -> 
bxe:Bxe_B0031 Putative phage protein                               126      104 (    -)      30    0.303    109      -> 
bxe:Bxe_B0467 conserved hypothetical protein                       654      104 (    -)      30    0.322    146      -> 
bxe:Bxe_A3988 ATP-dependent DNA helicase RecG           K03655     768      103 (    -)      29    0.358    67       -> 
bxe:Bxe_A1960 hypothetical protein                                 254      102 (    -)      29    0.330    91       -> 

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]