SSDB Paralog Search Result

KEGG ID :cal:CaO19.2772 (713 a.a.)
Definition:histone deacytylase family protein similar to S. cerevisiae HOS3 (YPL116W) which acts on ribosomal RNA gene histones; K11484 histone deacetylase HOS3
Update status:T00189 (ahh,alu,ari,bado,batr,bcoa,blr,bpeu,bsuc,btha,bul,cabo,cfz,cjq,cjy,cpat,ecli,eclx,ecly,eclz,elb,fpt,ftc,ftv,ftz,gfr,hic,hiw,hix,hpyc,hpyd,hpye,hpyf,hpyg,hpyh,hpyj,kpne,kpnu,lfa,lhd,mcai,mcap,mcar,mfi,mhaq,mhay,mvs,nin,pcz,pfb,pff,pfw,plb,plc,pli,ppse,rhb,sena,senc,seno,senq,senv,sft,sld,sxo,xcm,xcn,xcu,xnm,xoy,yee,ypj,ypl,ypv,ypw : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 9 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
cal:CaO19.10288 histone deacytylase family protein simi  K11484     713    4806    1101    1.000    713     
cal:CaO19.10137 strong similarity to S. cerevisiae HDA1  K11407     833     209      53    0.278    230     
cal:CaO19.2606 strong similarity to S. cerevisiae HDA1   K11407     833     209      53    0.278    230     
cal:CaO19.14093 one of two distinct genes with strong s  K06067     577     123      34    0.375    48      
cal:CaO19.6801 one of two distinct genes with strong si  K06067     577     123      34    0.375    48      
cal:CaO19.10262 second gene similar to S. cerevisiae AR             974     116      32    0.308    78      
cal:CaO19.2748 second gene similar to S. cerevisiae ARG             974     116      32    0.308    78      
cal:CaO19.10352 one of two distinct genes with strong s  K06067     480     114      32    0.317    63      
cal:CaO19.2834 one of two distinct genes with strong si  K06067     480     114      32    0.317    63      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]