SSDB Paralog Search Result

KEGG ID :cal:CaO19.5211 (433 a.a.)
Definition:Mitochondrial NADP-specific isocitrate dehydrogenase; K00031 isocitrate dehydrogenase
Update status:T00189 (aah,abp,abv,adl,ahd,ahp,ahr,asg,bamt,bans,ble,bmet,bor,bpsd,bpsm,bpum,bsc,bsf,ccf,ccoi,ccy,cjer,clt,cmn,cmo,cput,ctec,ctfw,dav,dja,dsq,echj,echl,echs,ecoh,elv,fme,gbc,gbs,gtr,hcs,hct,hlr,hpyb,hym,jag,koy,kpa,kps,lfp,lmoq,lmox,lmr,mdm,mlr,mrr,mtq,mtut,mtuu,ngl,npa,nvn,oas,paei,paeo,patr,pbc,pch,pco,pes,pfp,pmum,ppac,ppq,psq,puf,rbc,rla,rpj,rus,sagp,sauj,sauk,sauq,saut,sauv,sauw,saux,sauy,shs,sla,ssuy,tap,tcm,tms,tpas,wse,yel,zmr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 16 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
cal:CaO19.12678 Mitochondrial NADP-specific isocitrate   K00031     433    2821     649    1.000    433     
cal:CaO19.3733 cytosolic NADP-specific isocitrate dehyd  K00031     412    2083     481    0.752    404     
cal:CaO19.11218 N terminus of cytosolic NADP-specific i             270    1192     278    0.662    266     
cal:CaO19.11217 C terminus of cytosolic NADP-specific i             142     738     174    0.832    137     
cal:CaO19.10060 homoisocitrate dehydrogenase             K05824     376     185      48    0.229    420     
cal:CaO19.2525 homoisocitrate dehydrogenase              K05824     376     185      48    0.229    420     
cal:CaO19.12289 Mitochondrial isocitrate dehydrogenase1  K00030     193     172      45    0.277    213     
cal:CaO19.4826 Mitochondrial isocitrate dehydrogenase1   K00030     193     172      45    0.277    213     
cal:CaO19.7080 similar to S. cerevisiae isopropyl malat  K00052     373     146      39    0.234    414     
cal:CaO19_7080 hypothetical protein                      K00052     373     146      39    0.234    414     
cal:CaO19.13213 isocitrate dehydrogenase                 K00030     369     137      37    0.235    311     
cal:CaO19.5791 isocitrate dehydrogenase                  K00030     369     137      37    0.235    311     
cal:CaO19.11035 Nuclear pore protein without peptide re  K14300    1032     105      30    0.217    180     
cal:CaO19.3552 Nuclear pore protein without peptide rep  K14300    1032     105      30    0.217    180     
cal:CaO19.14093 one of two distinct genes with strong s  K06067     577     102      29    0.200    285     
cal:CaO19.6801 one of two distinct genes with strong si  K06067     577     102      29    0.206    286     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]