SSDB Paralog Search Result

KEGG ID :cal:CaO19.8421 (471 a.a.)
Definition:one of two potential aminotransferase genes similar to S. cerevisiae UGA1 (YGR019W) gamma-aminobutyrate (GABA) transaminase; K13524 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase
Update status:T00189 (babr,banh,bcef,blx,blz,bmee,bmp,bpsh,brp,bsg,bsul,bsut,bsw,bthm,bthr,btv,but,bww,cbz,cdo,cjv,cmg,cmm,cun,cuq,cus,cuz,eclg,fpq,fpu,frf,hav,hia,hir,kpb,kpt,kpx,lia,lii,lio,llx,mavd,mde,mfc,mgj,mhom,mie,msb,msh,msn,mus,nmx,npn,nte,pcv,ppnm,ppud,pstt,pxb,sagt,smer,stax,syj,teu,tki,trm,vcq,vcy,vda,vtu : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 12 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
cal:CaO19.803 C terminal fragment of allelic CaP19.8421             282    1696     392    0.992    255     
cal:CaO19.8474 one of two potential aminotransferase ge  K13524     434    1645     381    0.575    414     
cal:CaO19.854 one of two potential aminotransferase gen  K13524     434    1645     381    0.575    414     
cal:CaO19.802 N terminal fragment of allelic CaP19.8421             228    1440     334    0.956    227     
cal:CaO19.11254 Acetylornithine aminotransferase; allel  K00818     455     343      84    0.263    418     
cal:CaO19.13086 Ornithine aminotransferase               K00819     436     326      80    0.265    434     
cal:CaO19.5641 Ornithine aminotransferase                K00819     436     326      80    0.265    434     
cal:CaO19.3771 Acetylornithine aminotransferase; corres             265     262      66    0.245    245     
cal:CaO19.11051 second version of adenosylmethionine-8-             486     248      62    0.243    415     
cal:CaO19.3567 second version of adenosylmethionine-8-a             486     248      62    0.243    415     
cal:CaO19.10122 adenosylmethionine-8-amino-7-oxononanoa  K00833     433     206      53    0.265    257     
cal:CaO19.2591 adenosylmethionine-8-amino-7-oxononanoat  K00833     433     206      53    0.265    257     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]