SSDB Paralog Search Result

KEGG ID :cbr:CBG04588 (455 a.a.)
Definition:C. briggsae CBR-HDA-1 protein; K06067 histone deacetylase 1/2
Update status:T01054 (aoa,asq,avu,bcig,bgy,bhu,boe,btho,jaz,kba,mbf,myz,xho : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Threshold:
  

Search Result : 9 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
cbr:CBG09063 Hypothetical protein CBG09063              K06067     455     2132 (    -)     492    0.667    453      -> 
cbr:CBG18689 C. briggsae CBR-HDA-3 protein              K06067     458     1908 (    -)     441    0.617    439      -> 
cbr:CBG15416 Hypothetical protein CBG15416              K06067     470     1793 (    -)     415    0.584    433      -> 
cbr:CBG13352 C. briggsae CBR-HDA-2 protein              K06067     503     1301 (    -)     302    0.485    379      -> 
cbr:CBG19959 Hypothetical protein CBG19959              K11407     935      360 (    -)      88    0.380    171      -> 
cbr:CBG16328 C. briggsae CBR-HDA-4 protein              K11406     892      356 (    -)      87    0.280    300      -> 
cbr:CBG20677 C. briggsae CBR-HDA-6 protein                         505      341 (    -)      84    0.260    289      -> 
cbr:CBG09630 Hypothetical protein CBG09630              K11418     326      326 (    -)      80    0.282    323      -> 
cbr:CBG03124 Hypothetical protein CBG03124              K11407     776      239 (    -)      60    0.218    435      -> 

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]