SSDB Paralog Search Result

KEGG ID :cbr:CBG09063 (455 a.a.)
Definition:Hypothetical protein CBG09063; K06067 histone deacetylase 1/2
Update status:T01054 (aso,ass,badl,baft,bcar,bcor,bdh,bdo,bgs,bmyc,bpv,bsz,btx,caj,caq,cii,cjc,cuv,eaa,eao,eft,ete,fpc,gst,hro,kok,mbq,mcr,mjh,ngg,nle,oah,palk,rat,rbt,sbv,sfn,sht,sxy,umr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 16 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
cbr:CBG04588 C. briggsae CBR-HDA-1 protein               K06067     455    2132     492    0.667    453     
cbr:CBG18689 C. briggsae CBR-HDA-3 protein               K06067     458    1810     418    0.570    447     
cbr:CBG15416 Hypothetical protein CBG15416               K06067     470    1588     368    0.505    436     
cbr:CBG13352 C. briggsae CBR-HDA-2 protein               K06067     503    1247     290    0.430    442     
cbr:CBG20677 C. briggsae CBR-HDA-6 protein                          505     372      91    0.251    386     
cbr:CBG16328 C. briggsae CBR-HDA-4 protein               K11406     892     334      82    0.268    298     
cbr:CBG19959 Hypothetical protein CBG19959               K11407     935     334      82    0.271    295     
cbr:CBG09630 Hypothetical protein CBG09630               K11418     326     282      70    0.242    314     
cbr:CBG03124 Hypothetical protein CBG03124               K11407     776     264      66    0.243    321     
cbr:CBG01331 Hypothetical protein CBG01331                          679     118      33    0.244    213     
cbr:CBG14172 C. briggsae CBR-SUL-1 protein               K14607     681     112      31    0.285    123     
cbr:CBG17396 Hypothetical protein CBG17396                          815     106      30    0.255    212     
cbr:CBG10468 Hypothetical protein CBG10468                          319     102      29    0.282    85      
cbr:CBG03584 Hypothetical protein CBG03584                          479     100      29    0.197    391     
cbr:CBG05193 Hypothetical protein CBG05193                          415     100      29    0.242    91      
cbr:CBG12300 Hypothetical protein CBG12300                          379     100      29    0.256    90      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]