SSDB Paralog Search Result

KEGG ID :cci:CC1G_11289 (803 a.a.)
Definition:DNA ligase I; K10747 DNA ligase 1
Update status:T01275 (ari,atf,awd,bado,bceo,bdl,bfn,blr,bmyo,bpeu,btha,bub,bul,cabo,ccel,cjl,cjw,cpae,cpat,csq,elb,fpt,gfr,hak,kmi,kpc,lfa,lha,lhd,lmu,magq,mavi,mbx,mey,mhat,mvc,mvs,nin,paeb,pbj,pbt,pcz,pdf,ped,pfb,pff,pft,pfw,ppoy,ppse,rhb,rmn,saug,senl,senq,senv,sft,sld,smua,syh,tmc,xcf,xcr,xcw,xdo,xnm,xoy,xpo : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 15 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
cci:CC1G_01985 DNA ligase                                K10747     833    1277     297    0.340    858     
cci:CC1G_14831 DNA ligase IV                             K10777     970     446     108    0.278    381     
cci:CC1G_14863 hypothetical protein                      K10777     868     279      69    0.269    432     
cci:CC1G_00772 hypothetical protein                      K15304     673     173      45    0.256    203     
cci:CC1G_02718 hypothetical protein                                1026     151      40    0.280    118     
cci:CC1G_12485 ribosome biogenesis protein               K14832    1122     150      40    0.266    184     
cci:CC1G_04733 hypothetical protein                                 640     137      37    0.331    130     
cci:CC1G_03506 nucleoporin nup189                        K14297     985     125      34    0.306    98      
cci:CC1G_09301 hypothetical protein                                 467     124      34    0.324    139     
cci:CC1G_08643 ATP-dependent RNA helicase DBP3           K14811     671     122      34    0.306    144     
cci:CC1G_14189 hypothetical protein                                 397     117      33    0.303    99      
cci:CC1G_06624 hypothetical protein                                 614     111      31    0.304    102     
cci:CC1G_11560 hypothetical protein                                 349     106      30    0.331    136     
cci:CC1G_06085 hypothetical protein                                 283     104      30    0.337    92      
cci:CC1G_01721 hypothetical protein                                 902     103      29    0.300    130     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]