SSDB Paralog Search Result

KEGG ID :cel:CELE_F41H10.6 (955 a.a.)
Definition:Histone deacetylase 6; K11407 histone deacetylase 6
Update status:T00019 (acg,adt,aer,anx,arw,asan,asy,aui,boe,bop,bvl,carc,dab,dch,ege,erl,gar,gho,got,hrb,hsf,hyg,kur,lax,let,lut,magx,mix,mvd,myg,naa,pecq,pkt,pnr,psuw,rab,scx,srw,thv,tur,vbl : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 12 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
cel:CELE_C10E2.3 Histone deacetylase 4                   K11406     869     775     183    0.383    368     
cel:CELE_Y51H1A.5 Histone DeAcetylase                               517     657     156    0.338    367     
cel:CELE_F43G6.11 Histone DeAcetylase                               508     577     137    0.321    324     
cel:CELE_R06C1.1 Histone deacetylase                     K06067     465     378      92    0.278    313     
cel:CELE_C08B11.2 Putative histone deacetylase 2         K06067     507     373      91    0.279    337     
cel:CELE_C53A5.3 Histone deacetylase 1                   K06067     461     345      84    0.299    261     
cel:CELE_C35A5.9 Histone DeAcetylase                     K11418     334     256      64    0.228    334     
cel:CELE_F43G6.17 Uncharacterized protein                           281     209      53    0.237    278     
cel:CELE_EEED8.16 BRCA1-associated protein homolog 2     K10632     590     207      53    0.345    87      
cel:CELE_Y71A12B.9 Ubiquitin carboxyl-terminal hydrolas             550     177      46    0.352    71      
cel:CELE_F09D1.1 Ubiquitin Specific Protease             K12847     602     153      41    0.277    101     
cel:CELE_K10G6.2 Delta and OSM-11-like                              297     100      29    0.329    82      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]