SSDB Paralog Search Result

KEGG ID :cmi:CMM_2074 (832 a.a.)
Definition:conserved hypothetical protein/ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD
Update status:T00529 (abat,aoa,biu,bmay,bmec,boe,bpsl,bsem,bstg,bxi,cann,ccaj,ccan,cceu,cdip,cdk,cell,cfj,cfk,cman,csem,cser,cyi,eai,ecls,epz,fox,fvr,ghi,glz,keu,lvs,nai,ndv,nsd,nta,ocm,ome,opf,pazo,pcon,psco,pswu,pvr,rbb,rbp,rss,snw,strd,sulf,sure,synw,tci,tum,tvs,zju : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Threshold:
  

Search Result : 10 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
cmi:CMM_0333 4-phosphopantetheinyl transferase                     239      151 (    -)      40    0.343    178      -> 
cmi:CMM_1378 putative ATP-dependant serine protease     K07391     518      151 (    -)      40    0.254    382      -> 
cmi:CMM_0301 putative transcriptional regulator, TetR f            249      145 (    -)      39    0.336    259      -> 
cmi:CMM_1410 putative ABC transporter ATP-binding prote            545      111 (    -)      31    0.302    126      -> 
cmi:CMM_2348 putative siderophore-interacting protein              295      107 (    -)      30    0.328    128      -> 
cmi:CMM_2227 hypothetical membrane protein                         278      105 (    -)      30    0.302    96       -> 
cmi:CMM_2535 putative serine protease, peptidase family           1226      105 (    -)      30    0.302    149      -> 
cmi:CMM_0295 putative transcriptional regulator, LacI f            336      102 (    -)      29    0.306    121      -> 
cmi:CMM_0323 putative acetyltransferase, GnaT family               287      102 (    -)      29    0.301    193      -> 
cmi:CMM_1158 putative methylase of peptide chain releas K02493     291      100 (    -)      29    0.340    144      -> 

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]