SSDB Paralog Search Result

KEGG ID :cqu:CpipJ_CPIJ013384 (431 a.a.)
Definition:histone deacetylase 3; K11404 histone deacetylase 3
Update status:T01079 (abaa,abau,abk,abw,axs,babo,babr,bamy,banh,bhm,blx,bmal,bmee,bsui,bthe,bthm,ced,cem,cen,cft,cfx,cgj,cgq,cjv,echp,echv,echw,ecla,eclc,efq,kln,kom,kph,kpk,kpq,kpz,law,lsj,mak,mavr,may,maz,mbz,mcat,ngi,ocu,paea,paee,paef,paeh,paej,paen,paeq,pbd,pcp,pda,pfn,pgm,pmul,pod,prh,pste,pstt,pstu,psw,sagc,seps,sgu,smer,smia,smub,sthe,syj,synd,synk,synr,vcq,xfl,xfs,zmc : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 7 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
cqu:CpipJ_CPIJ006836 histone deacetylase Rpd3            K06067     489    1900     439    0.600    427     
cqu:CpipJ_CPIJ019172 histone deacetylase                            275    1179     275    0.657    239     
cqu:CpipJ_CPIJ013336 histone deacetylase 19                         402     861     202    0.392    339     
cqu:CpipJ_CPIJ012311 histone deacetylase                 K11407    1108     476     114    0.294    313     
cqu:CpipJ_CPIJ001619 histone deacetylase 11              K11418     350     275      69    0.245    294     
cqu:CpipJ_CPIJ011847 histone deacetylase                 K11406    1031     275      69    0.259    301     
cqu:CpipJ_CPIJ019171 histone deacetylase                            179     244      61    0.653    49      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]