SSDB Paralog Search Result

KEGG ID :csa:Csal_0497 (325 a.a.)
Definition:ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase
Update status:T00347 (abp,abv,adl,bor,bpsm,bsc,cput,dav,dsq,ecoh,fme,gbc,gbs,gtr,hlr,jag,lmoq,lmox,mlr,mrr,mtq,mtut,mtuu,npa,oas,pco,pes,pfp,psq,rus,sauj,sauk,sauq,saut,sauv,sauw,saux,sauy,shs,sla,tms,wse : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 8 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
csa:Csal_1593 ribosomal large subunit pseudouridine syn  K06179     315     369      90    0.323    334     
csa:Csal_2894 tRNA pseudouridine synthase C              K06175     261     293      73    0.295    241     
csa:Csal_2800 LysR family transcriptional regulator                 291     111      31    0.272    195     
csa:Csal_1773 hypothetical protein                                  236     105      30    0.279    140     
csa:Csal_0214 ABC transporter-like protein               K02031..   586     103      29    0.225    227     
csa:Csal_0204 Rhs element Vgr protein                               869     102      29    0.313    147     
csa:Csal_2254 Rhs element Vgr protein                               875     102      29    0.339    109     
csa:Csal_2274 Rhs element Vgr protein                               871     102      29    0.339    109     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]