SSDB Paralog Search Result

KEGG ID :cse:Cseg_3113 (883 a.a.)
Definition:DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD
Update status:T01221 (aaus,aln,bhi,bmab,bmul,boc,bthl,ccof,cku,cmh,dtn,duc,fil,fiy,ftd,ftx,fty,hdl,lis,mbat,mef,meq,metm,mlt,msj,msw,msz,pck,pfre,rav,slh,sns,syb,tah,xoz : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 5 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
cse:Cseg_4093 ATP dependent DNA ligase                   K10747     536     257      64    0.289    363     
cse:Cseg_2093 capsule synthesis protein CapA             K07282     378     146      39    0.326    193     
cse:Cseg_0243 PGAP1 family protein                                  487     111      31    0.393    84      
cse:Cseg_1285 hypothetical protein                                  269     111      31    0.300    80      
cse:Cseg_0871 PpiC-type peptidyl-prolyl cis-trans isome  K03769     329     105      30    0.306    121     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]