SSDB Paralog Search Result

KEGG ID :cti:RALTA_B2120 (916 a.a.)
Definition:ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP)
Update status:T00702 (aal,ahp,ahr,asg,ble,bmet,bvt,cmn,cmo,ctes,dja,echj,echl,echs,elv,hcs,hct,hym,lfp,mcs,mdm,ngl,nvn,patr,pch,pmum,ppac,puf,rbc,rla,slv,tap,tcm,vir : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 93 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
cti:pRALTA_0093 ATP-dependent DNA ligase (EC:6.5.1.1)    K01971     845    2943     677    0.543    880     
cti:RALTA_B0290 ATP-dependent DNA ligase (EC:6.5.1.1)    K01971     845    2936     675    0.528    904     
cti:RALTA_B1594 ATP-dependent DNA ligase (EC:6.5.1.1)    K01971     557     245      62    0.281    416     
cti:RALTA_A0517 DNA/RNA helicase                                    997     140      38    0.241    282     
cti:RALTA_A1935 DNA polymerase III subunits gamma and t  K02343     769     136      37    0.224    447     
cti:RALTA_A2429 hypothetical protein                     K09800    1383     134      36    0.314    191     
cti:RALTA_A1294 dihydrolipoamide acetyltransferase (EC:  K00627     562     133      36    0.252    254     
cti:RALTA_B0100 diguanylate cyclase                                1064     130      35    0.243    645     
cti:RALTA_A1666 inosine 5'-monophosphate dehydrogenase   K00088     487     128      35    0.238    315     
cti:RALTA_A2182 hypothetical protein                                394     128      35    0.286    105     
cti:RALTA_A2653 histone h1/h5 family protein, hct subfa             187     128      35    0.333    81      
cti:RALTA_A0910 bacteriophage p2 tail protein gpt; tail             965     123      34    0.222    315     
cti:RALTA_A2115 hypothetical protein                     K08086     948     122      34    0.270    326     
cti:RALTA_B1244 aspartate/glutamate/hydantoin racemase             3569     122      34    0.241    522     
cti:RALTA_B1983 squalene hopene cyclase (EC:5.4.99.17)   K06045     681     121      33    0.257    350     
cti:RALTA_A1078 lipoprotein                                         393     120      33    0.247    376     
cti:RALTA_B0197 type II secretion system protein         K12511     356     118      33    0.265    253     
cti:RALTA_B1429 hypothetical protein                                612     118      33    0.243    255     
cti:RALTA_B2149 hook-length control protein FliK         K02414     482     117      33    0.263    297     
cti:RALTA_B1221 hypothetical protein                                470     116      32    0.348    135     
cti:RALTA_A1585 exoprotein, adhesin or hemolysin         K15125    3469     113      32    0.258    240     
cti:RALTA_A1938 helicase, c_term recb family exonucleas             957     113      32    0.240    313     
cti:RALTA_B1225 non ribosomal peptide synthase (EC:1.1.            1506     113      32    0.255    435     
cti:RALTA_B1536 hypothetical protein                                502     113      32    0.210    371     
cti:RALTA_A0177 soluble choline dehydrogenase (EC:1.1.3             587     112      31    0.227    132     
cti:RALTA_A1697 hypothetical protein                                444     112      31    0.320    178     
cti:RALTA_A1814 hypothetical protein                     K07175     567     112      31    0.277    159     
cti:RALTA_B0302 isoquinoline 1-oxidoreductase subunit b  K07303     763     112      31    0.224    370     
cti:RALTA_B0490 hypothetical protein                     K16051     566     112      31    0.277    184     
cti:RALTA_B1030 hypothetical protein                                495     112      31    0.262    458     
cti:RALTA_A0374 hypothetical protein                     K07141     201     111      31    0.336    140     
cti:RALTA_A0726 chemotaxis protein CheW                  K02487..  1979     111      31    0.291    141     
cti:RALTA_A1509 DNA translocase                          K03466    1108     111      31    0.252    321     
cti:RALTA_B0554 l-carnitine dehydratase/bile acid-induc             407     111      31    0.259    147     
cti:RALTA_A0260 ammonium transporter (amt family)        K03320     502     110      31    0.321    134     
cti:RALTA_A1850 translation initiation factor if-2       K02519     963     110      31    0.250    200     
cti:RALTA_A1920 protein-l-isoaspartate o-methyltransfer  K00573     306     110      31    0.266    248     
cti:RALTA_A1929 hypothetical protein                                338     110      31    0.234    201     
cti:RALTA_B1728 transporter                                         672     110      31    0.251    307     
cti:RALTA_B1972 hypothetical protein                                568     110      31    0.250    392     
cti:RALTA_A0731 aldehyde dehydrogenase (EC:1.2.1.3)      K00128     478     109      31    0.212    467     
cti:RALTA_A1198 hypothetical protein                                222     109      31    0.378    98      
cti:RALTA_A2562 anthranilate/para-aminobenzoate synthas  K03342     641     109      31    0.270    326     
cti:RALTA_B0787 hypothetical protein                     K03607     229     109      31    0.264    276     
cti:RALTA_A0134 tonb-dependent receptor                  K02014     731     108      30    0.241    295     
cti:RALTA_A3217 inner membrane protein translocase comp  K03217     559     108      30    0.218    271     
cti:pRALTA_0659 Histone-like nucleoid-structuring prote             415     108      30    0.347    124     
cti:RALTA_B1853 hypothetical protein                                446     107      30    0.265    343     
cti:RALTA_A0049 enzyme, dienelactone hydrolase                      371     106      30    0.327    98      
cti:RALTA_A1609 aldehyde dehydrogenase (EC:1.2.1.-)                 477     106      30    0.238    344     
cti:RALTA_A3123 copper transporting p-type atpase        K17686     842     106      30    0.266    244     
cti:RALTA_B2273 esterase of the alpha-beta hydrolase su  K07001     760     106      30    0.239    351     
cti:RALTA_A3043 allantoate amidohydrolase (EC:3.5.1.87)  K06016     418     105      30    0.244    234     
cti:RALTA_B0524 acyl-CoA dehydrogenase oxidoreductase (             395     105      30    0.241    257     
cti:RALTA_B1193 hypothetical protein                                241     105      30    0.303    241     
cti:RALTA_A0507 hypothetical protein                                315     104      30    0.276    272     
cti:RALTA_A0528 hypothetical protein                     K07566     329     104      30    0.328    116     
cti:RALTA_A0914 phage tail fiber assembly protein                   291     104      30    0.273    238     
cti:RALTA_A1082 gamma-glutamyltranspeptidase (EC:2.3.2.  K00681     696     104      30    0.225    559     
cti:RALTA_A2416 formate dehydrogenase, cytochrome C sub  K00127     406     104      30    0.276    127     
cti:RALTA_A2497 oxidoreductase (EC:1.-.-.-)                         338     104      30    0.239    276     
cti:RALTA_A2838 mannitol dehydrogenase (fructuronate re  K00040     481     104      30    0.243    276     
cti:RALTA_B0173 protease, transglutaminase motif                    656     104      30    0.282    149     
cti:RALTA_B0621 outer membrane drug efflux lipoprotein   K18139     620     104      30    0.208    168     
cti:RALTA_B1275 gamma-glutamyltranspeptidase (EC:2.3.2.  K00681     538     104      30    0.245    494     
cti:RALTA_B1413 6-aminohexanoate-dimer hydrolase (EC:3.  K01453     458     104      30    0.232    306     
cti:RALTA_B1959 transporter exporter rnd family          K07003     878     104      30    0.277    119     
cti:RALTA_B1979 hypothetical protein                               1359     104      30    0.263    186     
cti:RALTA_B2118 sensor hybrid histidine kinase with pas             662     104      30    0.231    472     
cti:RALTA_B2186 serine/threonine kinase with signal tra            1747     104      30    0.260    200     
cti:RALTA_A0865 cytochrome C, alcohol dehydrogenase-lik  K18030     975     103      29    0.243    210     
cti:RALTA_A1532 hypothetical protein                     K07114     553     103      29    0.254    209     
cti:RALTA_A1708 hypothetical protein                                335     103      29    0.234    261     
cti:RALTA_A2353 secretion protein, hlyd family                      369     103      29    0.245    233     
cti:RALTA_B1802 two-component sensor response receiver   K07677    1102     103      29    0.257    175     
cti:RALTA_A1538 chaperone heat-shock protein                        926     102      29    0.221    429     
cti:RALTA_A1796 d--3-hydroxybutyrate oligomer hydrolase  K07518     713     102      29    0.295    176     
cti:RALTA_A2259 membrane bound peptidase; nefd homolog   K07403     479     102      29    0.287    174     
cti:RALTA_A2294 hypothetical protein                                359     102      29    0.298    131     
cti:RALTA_B0204 exonuclease sbcc                         K03546    1020     102      29    0.224    638     
cti:RALTA_B0461 transmembrane isoquinoline 1-oxidoreduc  K07303     765     102      29    0.238    320     
cti:RALTA_B1312 amidase (EC:3.5.1.87)                    K06016     424     102      29    0.223    264     
cti:RALTA_A1079 hypothetical protein                                396     101      29    0.312    93      
cti:RALTA_B0150 LysR family transcriptional regulator               329     101      29    0.316    158     
cti:RALTA_B0619 tonb-dependent siderophore receptor, fe  K02014     745     101      29    0.325    77      
cti:RALTA_A0045 septum formation inhibitor               K03610     275     100      29    0.361    61      
cti:RALTA_A0163 peptidase, s8 family (subtilisin) (EC:3             692     100      29    0.238    298     
cti:RALTA_A1152 hypothetical protein                                445     100      29    0.252    420     
cti:RALTA_A1212 peptide ABC transporter substrate-bindi  K02035     548     100      29    0.288    177     
cti:RALTA_A2489 imidazolonepropionase (EC:3.5.2.7)       K01468     417     100      29    0.249    433     
cti:RALTA_A2556 poly(a) polymerase i (EC:2.7.7.19)       K00970     507     100      29    0.251    239     
cti:RALTA_B1268 sensor signal transduction histidine ki             436     100      29    0.230    296     
cti:RALTA_B2133 hypothetical protein                                440     100      29    0.367    98      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]