SSDB Paralog Search Result

KEGG ID :dosa:Os03t0236200-01 (492 a.a.)
Definition:Similar to Glutamate decarboxylase isozyme 3 (EC 4.1.1.15).; K01580 glutamate decarboxylase
Update status:T02163 (aah,abp,abv,adl,ahd,ahp,ahr,asg,bamt,bans,ble,bmet,bor,bpsd,bpsm,bpum,bsc,bsf,ccf,ccoi,ccy,cjer,clt,cmn,cmo,cput,ctec,ctfw,dav,dja,dsq,echj,echl,echs,ecoh,elv,fme,gbc,gbs,gtr,hcs,hct,hlr,hpyb,hym,jag,koy,kpa,kps,lfp,lmoq,lmox,lmr,mdm,mlr,mrr,mtq,mtut,mtuu,ngl,npa,nvn,oas,paei,paeo,patr,pbc,pch,pco,pes,pfp,pmum,ppac,ppq,psq,puf,rbc,rla,rpj,rus,sagp,sauj,sauk,sauq,saut,sauv,sauw,saux,sauy,shs,sla,ssuy,tap,tcm,tms,tpas,wse,yel,zmr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 24 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
dosa:Os03t0720300-01 Similar to Glutamate decarboxylase  K01580     492    2834     652    0.862    493     
dosa:Os04t0447400-01 Similar to Glutamate decarboxylase  K01580     484    2580     594    0.775    493     
dosa:Os08t0465800-01 Similar to Glutamate decarboxylase  K01580     497    2556     588    0.765    498     
dosa:Os04t0447800-01 Glutamate decarboxylase (EC 4.1.1.  K01580     500    2327     536    0.696    503     
dosa:Os05t0421750-00 Similar to Glutamate decarboxylase             261     490     118    0.907    86      
dosa:Os01t0100900-01 Pyridoxal phosphate-dependent deca  K01634     539     313      77    0.239    356     
dosa:Os02t0541325-00 Similar to Serine decarboxylase.    K01590     396     194      50    0.258    244     
dosa:Os10t0105700-01 Similar to predicted protein.       K01590     390     175      46    0.280    157     
dosa:Os11t0473832-00 Similar to Serine decarboxylase.    K01590     405     164      43    0.250    196     
dosa:Os10t0380800-00 Similar to Tryptophan decarboxylas  K01592     526     157      42    0.230    473     
dosa:Os01t0770200-01 Aromatic L-amino acid decarboxylas  K01592     533     148      40    0.231    506     
dosa:Os08t0140300-01 Aromatic L-amino acid decarboxylas  K01592     514     127      35    0.207    458     
dosa:Os06t0680700-01 Cytochrome P450 family protein.     K00517     535     112      31    0.327    49      
dosa:Os07t0437500-01 Aromatic L-amino acid decarboxylas  K01592     497     109      31    0.198    363     
dosa:Os08t0140500-00 Similar to Tryptophan decarboxylas  K01592     523     107      30    0.213    342     
dosa:Os05t0510600-01 Similar to tyrosine/DOPA decarboxy  K01592     565     106      30    0.230    322     
dosa:Os02t0719700-01 IQ calmodulin-binding region domai             213     104      30    0.294    126     
dosa:Os06t0190700-00 Hypothetical conserved gene.                   542     103      29    0.266    173     
dosa:Os01t0879600-00 Protein of unknown function DUF506             302     102      29    0.227    203     
dosa:Os02t0564400-01 Similar to CLPX (Clp protease regu  K03544     645     101      29    0.249    217     
dosa:Os06t0714200-01 Similar to calcium dependent prote             623     101      29    0.212    151     
dosa:Os07t0588000-01 Interferon-related developmental r             438     101      29    0.241    137     
dosa:Os04t0572600-01 Similar to DNA-directed RNA polyme             451     100      29    0.263    80      
dosa:Os04t0660200-01 Similar to H0112G12.2 protein.      K08869     662     100      29    0.204    230     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]