SSDB Paralog Search Result

KEGG ID :fre:Franean1_5169 (408 a.a.)
Definition:ATP dependent DNA ligase
Update status:T00608 (aoa,avu,bgy,bhu,boe,btho,jaz,myz,xho : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Threshold:
  

Search Result : 16 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
fre:Franean1_5482 NADH dehydrogenase (quinone) (EC:1.6.            847      156 (    -)      41    0.313    217      -> 
fre:Franean1_5581 D-lactate dehydrogenase (cytochrome)            1050      112 (    -)      31    0.364    77       -> 
fre:Franean1_6703 hypothetical protein                             208      111 (    -)      31    0.330    115      -> 
fre:Franean1_5214 NADH dehydrogenase (quinone) (EC:1.6. K05565     980      110 (    -)      31    0.349    83       -> 
fre:Franean1_3800 Heat shock protein 70                            880      106 (    -)      30    0.306    245      -> 
fre:Franean1_4117 TAP domain protein                               556      106 (    -)      30    0.429    56       -> 
fre:Franean1_6487 WD-40 repeat protein                             780      106 (    -)      30    0.312    138      -> 
fre:Franean1_5582 ABC transporter related                          803      105 (    -)      30    0.330    100      -> 
fre:Franean1_5894 glycosyl transferase group 1                     382      104 (    -)      30    0.345    119      -> 
fre:Franean1_7127 multi-sensor hybrid histidine kinase             782      104 (    -)      30    0.329    152      -> 
fre:Franean1_5121 GCN5-related N-acetyltransferase                 203      103 (    -)      29    0.342    76       -> 
fre:Franean1_1719 methionyl-tRNA formyltransferase      K00604     311      102 (    -)      29    0.331    130      -> 
fre:Franean1_1697 Shikimate dehydrogenase substrate bin K00014     298      101 (    -)      29    0.308    120      -> 
fre:Franean1_5558 cyclic nucleotide-binding protein                470      101 (    -)      29    0.303    152      -> 
fre:Franean1_7212 putative heat shock protein, HSP90-fa           1315      101 (    -)      29    0.354    79       -> 
fre:Franean1_1656 conserved hypothetical protein                   689      100 (    -)      29    0.303    132      -> 

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]