SSDB Paralog Search Result

KEGG ID :geb:GM18_0111 (892 a.a.)
Definition:DNA ligase D; K01971 DNA ligase (ATP)
Update status:T01421 (aso,ass,bcor,bmyc,btx,caj,caq,cii,cuv,eaa,eao,ete,fpc,gst,mcr,mjh,ngg,oah,palk,rat,rbt,sbv,sxy : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 10 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
geb:GM18_1334 TonB family protein                        K03832     286     119      33    0.272    147     
geb:GM18_2001 hypothetical protein                                  612     117      33    0.286    84      
geb:GM18_0983 hypothetical protein                                  334     110      31    0.225    169     
geb:GM18_0080 CheR-type MCP methyltransferase (EC:2.1.1  K00575     474     109      31    0.237    371     
geb:GM18_0805 hypothetical protein                                  419     105      30    0.262    107     
geb:GM18_2585 hypothetical protein                                 1890     105      30    0.254    224     
geb:GM18_2815 PAS modulated Fis family sigma-54 specifi             455     105      30    0.251    295     
geb:GM18_1163 translation initiation factor IF-2         K02519     970     103      29    0.325    80      
geb:GM18_0984 OmpA/MotB domain-containing protein        K03286     450     101      29    0.284    109     
geb:GM18_1143 type II and III secretion system protein   K02453     862     100      29    0.314    102     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]