SSDB Paralog Search Result

KEGG ID :gpo:GPOL_c02790 (511 a.a.)
Definition:DNA ligase Lig (EC:6.5.1.1); K10747 DNA ligase 1
Update status:T01719 (ahh,alu,ari,bado,batr,bcoa,blr,bpeu,bsuc,btha,bul,cabo,cfz,cjq,cjy,cpat,ecli,eclx,ecly,eclz,elb,fpt,ftc,ftv,ftz,gfr,hic,hiw,hix,hpyc,hpyd,hpye,hpyf,hpyg,hpyh,hpyj,kpne,kpnu,lfa,lhd,mcai,mcap,mcar,mfi,mhaq,mhay,mvs,nin,pcz,pfb,pff,pfw,plb,plc,pli,ppse,rhb,sena,senc,seno,senq,senv,sft,sld,sxo,xcm,xcn,xcu,xnm,xoy,yee,ypj,ypl,ypv,ypw : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 12 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
gpo:GPOL_c05170 putative ATP-dependent DNA ligase        K01971     812     319      79    0.288    351     
gpo:GPOL_c47210 ATP-dependent DNA ligase (EC:6.5.1.1)               356     315      78    0.286    346     
gpo:GPOL_c37300 putative ferredoxin/ferredoxin--NADP re  K00528     564     152      40    0.253    407     
gpo:GPOL_c20020 tyrosine recombinase XerC                K03733     326     115      32    0.305    131     
gpo:GPOL_c19040 hypothetical protein                                362     106      30    0.305    128     
gpo:GPOL_c40960 putative acyl-CoA dehydrogenase                     323     106      30    0.308    172     
gpo:GPOL_c45610 putative CoA-transferase, family III                462     105      30    0.310    168     
gpo:GPOL_c50100 MviN domain-containing protein           K03980    1273     104      30    0.329    149     
gpo:GPOL_c35950 putative ABC drug resistance transporte  K01990     313     103      29    0.313    115     
gpo:GPOL_c36300 hypothetical protein                                142     103      29    0.319    116     
gpo:GPOL_c41430 von Willebrand factor type A domain-con             322     103      29    0.307    137     
gpo:GPOL_c16880 formamidopyrimidine-DNA glycosylase Mut  K05522     261     100      29    0.306    147     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]