SSDB Paralog Search Result

KEGG ID :gpo:GPOL_c02790 (511 a.a.)
Definition:DNA ligase Lig (EC:6.5.1.1); K01971 DNA ligase (ATP)
Update status:T01719 (babr,banh,bcef,blx,blz,bmee,bmp,bpsh,brp,bsg,bsul,bsut,bsw,bthm,bthr,btv,but,bww,cbz,cdo,cjv,cmg,cmm,cun,cuq,cus,cuz,eclg,fpq,fpu,frf,hav,hia,hir,kpb,kpt,kpx,lia,lii,lio,llx,mavd,mde,mfc,mgj,mhom,mie,msb,msh,msn,mus,nmx,npn,nte,pcv,ppnm,ppud,pstt,pxb,sagt,smer,stax,syj,teu,tki,trm,vcq,vcy,vda,vtu : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 12 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
gpo:GPOL_c05170 putative ATP-dependent DNA ligase        K01971     812     319      79    0.288    351     
gpo:GPOL_c47210 ATP-dependent DNA ligase (EC:6.5.1.1)    K01971     356     315      78    0.286    346     
gpo:GPOL_c37300 putative ferredoxin/ferredoxin--NADP re  K00528     564     152      40    0.253    407     
gpo:GPOL_c20020 tyrosine recombinase XerC                K03733     326     115      32    0.305    131     
gpo:GPOL_c19040 hypothetical protein                                362     106      30    0.305    128     
gpo:GPOL_c40960 putative acyl-CoA dehydrogenase                     323     106      30    0.308    172     
gpo:GPOL_c45610 putative CoA-transferase, family III                462     105      30    0.310    168     
gpo:GPOL_c50100 MviN domain-containing protein           K03980    1273     104      30    0.329    149     
gpo:GPOL_c35950 putative ABC drug resistance transporte  K01990     313     103      29    0.313    115     
gpo:GPOL_c36300 hypothetical protein                                142     103      29    0.319    116     
gpo:GPOL_c41430 von Willebrand factor type A domain-con             322     103      29    0.307    137     
gpo:GPOL_c16880 formamidopyrimidine-DNA glycosylase Mut  K05522     261     100      29    0.306    147     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]