SSDB Paralog Search Result

KEGG ID :hmg:100212302 (891 a.a.)
Definition:DNA ligase 4-like; K10777 DNA ligase 4
Update status:T01080 (abq,badl,baft,bcar,bcas,bced,bcen,bcib,bdh,bdo,bgs,bhs,bmk,bok,bpv,bsz,bxb,caj,cjc,clh,cnt,coa,dok,eaa,eft,fpc,fpo,fpy,hpak,hpas,hro,kok,lgi,mbj,mbq,mjh,mor,nle,oah,ori,pato,pda,pdu,pge,pmos,prc,psx,rat,rei,sbv,sepp,sequ,sfn,sht,sio,siq,stv,sxl,tpk,umr,vvl,wci,wct,ypq : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 70 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
hmg:101236307 ligase III, DNA, ATP-dependent             K10776     759     598     142    0.253    613     
hmg:100206246 DNA ligase 1-like                          K10747     625     227      58    0.237    358     
hmg:100214026 uncharacterized LOC100214026                         5431     139      38    0.200    475     
hmg:101239576 DNA ligase-like                                       235     127      35    0.233    206     
hmg:100214788 voltage-dependent calcium channel subunit             955     126      35    0.219    219     
hmg:101241581 voltage-dependent calcium channel subunit             655     122      34    0.218    202     
hmg:100215610 uncharacterized LOC100215610                         2525     119      33    0.211    341     
hmg:100210564 ubiquitin carboxyl-terminal hydrolase 24-  K11840    1504     118      33    0.232    396     
hmg:100205025 fibroblast growth factor receptor 3-like             1137     115      32    0.210    291     
hmg:100209315 coiled-coil domain-containing protein 146             819     115      32    0.209    469     
hmg:100211630 uncharacterized LOC100211630               K12172    3201     115      32    0.185    607     
hmg:101241223 uncharacterized LOC101241223                          695     115      32    0.204    211     
hmg:100198384 pescadillo homolog                         K14843     681     114      32    0.202    193     
hmg:100204640 COP9 signalosome complex subunit 1-like    K12175     657     113      32    0.197    229     
hmg:100213284 DNA topoisomerase 2-binding protein 1-A-l  K10728    1451     112      31    0.211    261     
hmg:100205429 putative ATP-dependent RNA helicase R290-             636     111      31    0.213    464     
hmg:101234923 uncharacterized LOC101234923                          182     111      31    0.287    101     
hmg:100197742 uncharacterized LOC100197742               K00981     968     110      31    0.243    206     
hmg:100201743 uncharacterized LOC100201743                          758     110      31    0.221    190     
hmg:100207065 dynein beta chain, ciliary-like                      3929     110      31    0.229    227     
hmg:101238772 transcriptional protein SWT1-like                     978     110      31    0.209    388     
hmg:101241132 zinc finger BED domain-containing protein             248     108      30    0.263    114     
hmg:101236469 uncharacterized LOC101236469                         1246     107      30    0.197    629     
hmg:100205079 alsin-like                                 K04575     970     106      30    0.272    81      
hmg:101240741 zinc finger MYM-type protein 1-like                   325     106      30    0.260    131     
hmg:100202384 translation factor GUF1 homolog, mitochon             595     105      30    0.250    120     
hmg:100214756 daple-like protein-like                               512     105      30    0.200    405     
hmg:101235811 uncharacterized LOC101235811                          199     105      30    0.255    157     
hmg:100198869 uncharacterized LOC100198869                         1600     104      30    0.224    317     
hmg:100202978 uncharacterized LOC100202978               K10369    2838     104      30    0.221    357     
hmg:100215186 DNA topoisomerase 1 type prokaryotic-like             872     104      30    0.227    277     
hmg:101235876 zinc finger BED domain-containing protein             508     104      30    0.200    441     
hmg:101239789 uncharacterized LOC101239789                          861     104      30    0.249    409     
hmg:101241726 leucine-rich repeat protein 1-like         K10348     478     104      30    0.270    122     
hmg:100198267 kelch-like family member 18                K10455     603     103      29    0.253    158     
hmg:100200611 uncharacterized LOC100200611                         1650     103      29    0.195    226     
hmg:100212991 lysine-specific demethylase 2A-like        K10276    1052     103      29    0.239    238     
hmg:100214840 peroxisomal acyl-coenzyme A oxidase 3-lik  K00232     838     103      29    0.219    215     
hmg:100215182 probable global transcription activator S  K11654     979     103      29    0.207    290     
hmg:101235833 uncharacterized LOC101235833                         5463     103      29    0.245    188     
hmg:101236292 translational activator GCN1-like                     532     103      29    0.237    211     
hmg:101238921 uncharacterized LOC101238921                         2058     103      29    0.261    134     
hmg:101240713 jerky protein homolog-like                            399     103      29    0.225    151     
hmg:101241486 GTPase-activating Rap/Ran-GAP domain-like             386     103      29    0.240    121     
hmg:100202511 arrestin domain-containing protein 3-like             266     102      29    0.328    61      
hmg:100210581 uncharacterized LOC100210581                          529     102      29    0.229    223     
hmg:100214714 uncharacterized LOC100214714                          452     102      29    0.229    192     
hmg:100215063 ubiquitin-like modifier activating enzyme  K03178    1242     102      29    0.211    266     
hmg:101239602 uncharacterized LOC101239602                          358     102      29    0.263    114     
hmg:100199832 ras-associating and dilute domain-contain            1656     101      29    0.225    258     
hmg:100202287 uncharacterized LOC100202287                          897     101      29    0.197    385     
hmg:100206699 ubiquitin specific peptidase 9, X-linked   K11840    2142     101      29    0.210    291     
hmg:100210335 receptor-type tyrosine-protein phosphatas            1103     101      29    0.301    143     
hmg:100214586 lysine (K)-specific demethylase 5A         K11446    1476     101      29    0.215    297     
hmg:101234593 uncharacterized LOC101234593                          342     101      29    0.226    230     
hmg:101236718 nucleoporin NUP188 homolog                 K14311     991     101      29    0.218    275     
hmg:101239072 uncharacterized LOC101239072                         2359     101      29    0.205    264     
hmg:101239264 zinc finger MYM-type protein 1-like                   373     101      29    0.232    207     
hmg:100197415 dnaJ homolog subfamily C member 27-like               267     100      29    0.294    126     
hmg:100199715 U5 small nuclear ribonucleoprotein 40 kDa  K12857     363     100      29    0.250    168     
hmg:100201523 uncharacterized LOC100201523                          505     100      29    0.274    113     
hmg:100203232 uncharacterized LOC100203232                          455     100      29    0.217    290     
hmg:100205929 DNA repair protein RAD50-like              K10866    1104     100      29    0.200    426     
hmg:100206979 uncharacterized LOC100206979                         2382     100      29    0.197    239     
hmg:100210554 uncharacterized LOC100210554                         1172     100      29    0.196    516     
hmg:100211484 uncharacterized LOC100211484                         1033     100      29    0.250    180     
hmg:100213341 spectrin beta chain, non-erythrocytic 2-l  K06115    2106     100      29    0.220    314     
hmg:100213799 cytosolic 10-formyltetrahydrofolate dehyd  K00289     747     100      29    0.212    400     
hmg:100214655 protein Hook homolog 3-like                K16536     390     100      29    0.217    254     
hmg:101237579 acyl-CoA synthetase family member 2, mito             287     100      29    0.263    137     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]