SSDB Paralog Search Result

KEGG ID :ica:Intca_3527 (466 a.a.)
Definition:ATP dependent DNA ligase; K01971 DNA ligase (ATP)
Update status:T01385 (amim,atr,bapf,bapg,bapu,bapw,bpsm,btra,btre,btrh,cmy,dav,ecoh,ecoo,hlr,myd,obr,pale,pes,psyr,ptg,rlb,rlu,slr,smir,sod,tcc,ths,tre : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 16 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
ica:Intca_0626 DNA polymerase LigD, ligase domain-conta  K01971     316     332      82    0.307    336     
ica:Intca_3214 ATP-dependent DNA ligase I (EC:6.5.1.1)   K01971     520     266      66    0.283    314     
ica:Intca_1898 DNA polymerase LigD, polymerase domain-c  K01971     322     148      40    0.418    67      
ica:Intca_0609 hypothetical protein                                 325     119      33    0.297    165     
ica:Intca_3376 SNF2-related protein                                1147     117      33    0.263    354     
ica:Intca_0098 esterase                                  K07214     381     111      31    0.290    145     
ica:Intca_0200 amidohydrolase                                       465     109      31    0.234    458     
ica:Intca_0580 catalase/peroxidase HPI (EC:1.11.1.6)     K03782     742     109      31    0.241    170     
ica:Intca_1280 group 1 glycosyl transferase                         662     108      30    0.249    301     
ica:Intca_0066 protein serine/threonine phosphatase      K01090     487     107      30    0.270    122     
ica:Intca_3553 AMP-dependent synthetase and ligase       K01897     502     107      30    0.238    168     
ica:Intca_3210 aminoglycoside phosphotransferase         K06979     368     104      30    0.254    197     
ica:Intca_2163 cysteine desulfurase (EC:2.8.1.7)                    420     102      29    0.270    282     
ica:Intca_0575 TAP domain-containing protein                        550     100      29    0.241    303     
ica:Intca_1073 MmpL domain-containing protein            K06994     688     100      29    0.261    165     
ica:Intca_1311 2,3-cyclic-nucleotide 2'phosphodiesteras  K01119     618     100      29    0.264    129     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]