SSDB Paralog Search Result

KEGG ID :iva:Isova_2011 (853 a.a.)
Definition:DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD
Update status:T01520 (acx,baco,bbx,bby,bgp,bpet,bue,cbaa,cbab,ceo,chz,cmq,csx,dmt,fne,fnt,fpi,fpj,fpm,fpx,fpz,hcc,hcd,kpv,ksa,lat,lho,mcan,mcg,mpw,msr,msx,myv,pman,ppro,pses,ron,sbw,shd,tbn,tig,txi,wcl,win,yal,yfr,yin,ykr,yro,yru : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 5 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
iva:Isova_1645 DNA polymerase LigD, polymerase domain-c             357     517     124    0.303    347     
iva:Isova_1647 ATP dependent DNA ligase                             385     388      94    0.310    381     
iva:Isova_2474 DNA ligase (EC:6.5.1.1)                   K10747     512     324      80    0.317    350     
iva:Isova_1235 regulatory protein TetR                              194     120      33    0.389    90      
iva:Isova_0476 cupin                                                243     108      30    0.303    142     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]