SSDB Paralog Search Result

KEGG ID :lci:LCK_01116 (307 a.a.)
Definition:pseudouridylate synthase, 23S RNA-specific (EC:4.2.1.70); K06180 23S rRNA pseudouridine1911/1915/1917 synthase
Update status:T00663 (abp,abv,adl,bor,bpsm,bsc,cput,dav,dsq,ecoh,fme,gtr,hlr,mlr,mrr,npa,oas,pco,pes,pfp,psq,sauj,sauk,sauq,saut,sauv,sauw,saux,sauy,shs,sla,tms,wse : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 4 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
lci:LCK_01172 pseudouridylate synthase, 23S RNA-specifi  K06180     300     548     131    0.393    270     
lci:LCK_01684 pseudouridylate synthase, 23S RNA-specifi  K06180     306     514     123    0.365    293     
lci:LCK_00680 16S rRNA uridine-516 pseudouridylate synt  K06178     249     148      40    0.247    243     
lci:LCK_01437 flavodoxin, putative                                  136     102      29    0.257    136     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]