SSDB Paralog Search Result

KEGG ID :lif:LINJ_24_1410 (536 a.a.)
Definition:putative histone deacetylase; K06067 histone deacetylase 1/2
Update status:T01112 (aoa,avu,bgy,bhu,boe,btho,jaz,myz,xho : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Threshold:
  

Search Result : 21 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
lif:LINJ_21_0740 putative histone deacetylase           K06067     430      715 (    -)     169    0.380    366      -> 
lif:LINJ_08_1300 putative histone deacetylase                      630      250 (    -)      63    0.256    367      -> 
lif:LINJ_08_1000 putative histone deacetylase                      653      234 (    -)      59    0.290    245      -> 
lif:LINJ_04_1200 conserved hypothetical protein                   2394      124 (    -)      34    0.306    147      -> 
lif:LINJ_04_0830 conserved hypothetical protein                   1396      121 (    -)      33    0.300    140      -> 
lif:LINJ_10_1120 conserved hypothetical protein                   1223      118 (    -)      33    0.326    95       -> 
lif:LINJ_35_0500 putative proteophosphoglycan ppg3                4238      118 (    -)      33    0.301    123      -> 
lif:LINJ_28_1530 putative DNA polymerase kappa                     753      110 (    -)      31    0.330    88       -> 
lif:LINJ_26_0700 conserved hypothetical protein                   2038      108 (    -)      30    0.414    87       -> 
lif:LINJ_11_0650 hypothetical protein, unknown function           1865      107 (    -)      30    0.400    65       -> 
lif:LINJ_35_0490 proteophosphoglycan ppg4                         5967      107 (    -)      30    0.352    71       -> 
lif:LINJ_35_0540 proteophosphoglycan 5                             999      106 (    -)      30    0.347    75       -> 
lif:LINJ_29_0380 protein kinase-like protein                      1550      105 (    -)      30    0.302    106      -> 
lif:LINJ_05_0770 hypothetical protein, unknown function           1376      102 (    -)      29    0.317    82       -> 
lif:LINJ_31_0310 putative mitotic centromere-associated K10393     951      102 (    -)      29    0.325    77       -> 
lif:LINJ_33_0130 conserved hypothetical protein         K16801     366      102 (    -)      29    0.329    70       -> 
lif:LINJ_26_2190 conserved hypothetical protein                   1564      101 (    -)      29    0.319    91       -> 
lif:LINJ_35_0480 conserved hypothetical protein                   1681      101 (    -)      29    0.329    79       -> 
lif:LINJ_35_2220 conserved hypothetical protein                   1069      101 (    -)      29    0.301    123      -> 
lif:LINJ_06_0810 hypothetical protein, unknown function           3340      100 (    -)      29    0.305    105      -> 
lif:LINJ_20_1120 conserved hypothetical protein                   1950      100 (    -)      29    0.372    78       -> 

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]