SSDB Paralog Search Result

KEGG ID :mcb:Mycch_4291 (748 a.a.)
Definition:DNA ligase D/DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD
Update status:T02150 (aace,alp,aoa,aper,beba,bhd,boe,brl,caf,cann,cdk,eai,een,elg,elq,emg,epz,fbu,fjg,gal,jda,kna,lagg,nta,pagc,pbas,pola,psta,psyc,rbb,rhy,sclf,selo,sfg,tes,tez,xve : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Threshold:
  

Search Result : 6 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
mcb:Mycch_0320 putative DNA primase                                412      498 (    -)     119    0.306    301      -> 
mcb:Mycch_4875 DNA polymerase LigD, polymerase domain p            347      462 (    -)     111    0.307    332      -> 
mcb:Mycch_1633 putative DNA primase                                319      406 (    -)      98    0.295    295      -> 
mcb:Mycch_4876 ATP-dependent DNA ligase                            369      362 (    -)      88    0.307    352      -> 
mcb:Mycch_4881 ATP-dependent DNA ligase                            361      312 (    -)      77    0.291    344      -> 
mcb:Mycch_1764 ATP-dependent DNA ligase I               K10747     514      302 (    -)      75    0.282    323      -> 

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]