SSDB Paralog Search Result

KEGG ID :mci:Mesci_0783 (837 a.a.)
Definition:DNA ligase D; K01971 DNA ligase (ATP)
Update status:T01401 (aah,abp,abv,adl,ahd,ahp,ahr,asg,bamt,bans,ble,bmet,bor,bpsd,bpsm,bpum,bsc,bsf,ccf,ccoi,ccy,cjer,clt,cmn,cmo,cput,ctec,ctfw,dav,dja,dsq,echj,echl,echs,ecoh,elv,fme,gbc,gbs,gtr,hcs,hct,hlr,hpyb,hym,jag,koy,kpa,kps,lfp,lmoq,lmox,lmr,mdm,mlr,mrr,mtq,mtut,mtuu,ngl,npa,nvn,oas,paei,paeo,patr,pbc,pch,pco,pes,pfp,pmum,ppac,ppq,psq,puf,rbc,rla,rpj,rus,sagp,sauj,sauk,sauq,saut,sauv,sauw,saux,sauy,shs,sla,ssuy,tap,tcm,tms,tpas,wse,yel,zmr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 21 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
mci:Mesci_2798 DNA ligase D                              K01971     829    2074     479    0.419    838     
mci:Mesci_3891 ATP dependent DNA ligase                  K01971     286     553     132    0.366    303     
mci:Mesci_6082 ATP dependent DNA ligase                  K01971     286     530     127    0.336    301     
mci:Mesci_3804 ATP dependent DNA ligase                  K01971     287     512     123    0.326    301     
mci:Mesci_5469 ATP dependent DNA ligase                  K01971     336     298      74    0.309    333     
mci:Mesci_0075 ATP dependent DNA ligase                  K01971     533     243      61    0.273    374     
mci:Mesci_3071 alpha-2-macroglobulin                     K06894    1832     127      35    0.252    206     
mci:Mesci_5957 ATPase domain-containing protein                    1186     122      34    0.225    480     
mci:Mesci_5066 Sua5/YciO/YrdC/YwlC family protein        K07566     355     116      32    0.239    264     
mci:Mesci_0202 DEAD/DEAH box helicase                    K03579     820     112      31    0.235    361     
mci:Mesci_5168 class II aldolase/adducin family protein             684     112      31    0.263    228     
mci:Mesci_2372 hypothetical protein                                 551     109      31    0.223    220     
mci:Mesci_5447 group 1 glycosyl transferase                         366     107      30    0.234    252     
mci:Mesci_3693 enolase (EC:4.2.1.11)                     K01689     424     105      30    0.258    252     
mci:Mesci_4783 ABC transporter                           K06147     626     105      30    0.228    399     
mci:Mesci_0711 BadF/BadG/BcrA/BcrD type ATPase                      293     104      30    0.229    292     
mci:Mesci_0381 family 5 extracellular solute-binding pr  K02035     529     101      29    0.233    417     
mci:Mesci_3332 FAD dependent oxidoreductase              K00315     817     101      29    0.224    416     
mci:Mesci_0377 family 5 extracellular solute-binding pr  K02035     528     100      29    0.222    418     
mci:Mesci_1020 hypothetical protein                                 179     100      29    0.250    140     
mci:Mesci_5174 translation initiation factor, aIF-2BI f  K08963     364     100      29    0.238    286     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]