SSDB Paralog Search Result

KEGG ID :mcx:BN42_20748 (759 a.a.)
Definition:Putative ATP dependent DNA ligase (ATP dependent polydeoxyribonucleotide synthase) (thermostable DNA ligase) (ATP dependent polynucleotide ligase) (SEALase) (DNA repair enzyme) (DNA joinase) (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD
Update status:T02421 (aaus,agw,arg,bacl,bgo,bgu,bmeg,bmel,fil,fiy,lis,mavu,mbac,mbw,mby,mef,mek,meq,metm,mls,paly,pck,pfre,pih,pko,pox,pri,reb,rmc,sals,shh,sns,sphi,srd,syb,vba,vcf,vcx,vcz,xbv,ypf,ypo : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 6 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
mcx:BN42_10320 hypothetical protein                                 409     485     116    0.342    298     
mcx:BN42_90249 hypothetical protein                                 346     410      99    0.298    326     
mcx:BN42_90250 Putative ATP-dependent DNA ligase LigC (             358     340      83    0.312    337     
mcx:BN42_41075 Putative ATP-dependent DNA ligase LigB (  K10747     510     296      73    0.287    327     
mcx:BN42_30022 Conserved protein of unknown function, P             624     102      29    0.500    40      
mcx:BN42_90104 Conserved protein of unknown function, P             561     101      29    0.514    37      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]