SSDB Paralog Search Result

KEGG ID :mcx:BN42_20748 (759 a.a.)
Definition:Putative ATP dependent DNA ligase (ATP dependent polydeoxyribonucleotide synthase) (thermostable DNA ligase) (ATP dependent polynucleotide ligase) (SEALase) (DNA repair enzyme) (DNA joinase); K01971 bifunctional non-homologous end joining protein LigD
Update status:T02421 (aace,alp,aoa,aper,beba,bhd,boe,brl,caf,cann,cdk,eai,een,elg,elq,emg,epz,fbu,fjg,gal,jda,kna,lagg,nta,pagc,pbas,pola,psta,psyc,rbb,rhy,sclf,selo,sfg,tes,tez,xve : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Threshold:
  

Search Result : 6 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
mcx:BN42_10320 Conserved protein of unknown function               409      485 (    -)     116    0.342    298      -> 
mcx:BN42_90249 Conserved protein of unknown function               346      410 (    -)      99    0.298    326      -> 
mcx:BN42_90250 Putative ATP-dependent DNA ligase LigC (            358      340 (    -)      83    0.312    337      -> 
mcx:BN42_41075 Putative ATP-dependent DNA ligase LigB ( K10747     510      296 (    -)      73    0.287    327      -> 
mcx:BN42_30022 Conserved protein of unknown function, P            624      102 (    -)      29    0.500    40       -> 
mcx:BN42_90104 Conserved protein of unknown function, P            561      101 (    -)      29    0.514    37       -> 

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]