SSDB Paralog Search Result

KEGG ID :mcx:BN42_90250 (358 a.a.)
Definition:Putative ATP-dependent DNA ligase LigC (polydeoxyribonucleotide synthase [ATP]) (polynucleotide ligase [ATP]) (sealase) (DNA repair protein) (DNA joinase) (EC:6.5.1.1); K01971 DNA ligase (ATP)
Update status:T02421 (aso,ass,badl,baft,bcor,bdh,bdo,bgs,bmyc,bpv,btx,caj,caq,cii,cjc,cuv,eaa,eao,ete,fpc,gst,mcr,mjh,ngg,nle,oah,palk,rat,rbt,sbv,sht,sxy : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 6 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
mcx:BN42_20748 Putative ATP dependent DNA ligase (ATP d  K01971     759     340      83    0.312    337     
mcx:BN42_41075 Putative ATP-dependent DNA ligase LigB (  K01971     510     266      66    0.293    355     
mcx:BN42_20580 GlnR-like transcriptional regulatory pro             255     105      30    0.267    146     
mcx:BN42_10257 Putative methyltransferase (methylase) (             437     101      29    0.215    274     
mcx:BN42_20981 hypothetical protein                                 452     101      29    0.265    215     
mcx:BN42_21134 Putative oxidoreductase (EC:1.-.-.-)                 372     100      29    0.229    275     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]