SSDB Paralog Search Result

KEGG ID :mes:Meso_0032 (536 a.a.)
Definition:ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP)
Update status:T00374 (abp,abv,adl,bamt,bans,bor,bpsd,bpsm,bsc,ccf,ccoi,ccy,clt,cput,ctec,ctfw,dav,dsq,ecoh,fme,gbc,gbs,gtr,hlr,jag,lmoq,lmox,mlr,mrr,mtq,mtut,mtuu,npa,oas,paei,paeo,pco,pes,pfp,psq,rpj,rus,sauj,sauk,sauq,saut,sauv,sauw,saux,sauy,shs,sla,ssuy,tms,wse,zmr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 13 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
mes:Meso_1150 ATP dependent DNA ligase                   K01971     845     246      62    0.283    357     
mes:Meso_2700 ATP-dependent DNA ligase (EC:6.5.1.1)      K01971     365     206      53    0.262    366     
mes:Meso_1831 putative nitrilotriacetate monooxygenase              430     124      34    0.308    133     
mes:Meso_2793 cytochrome c, class I                                 379     119      33    0.240    229     
mes:Meso_3109 two-component response regulator                      265     116      32    0.236    216     
mes:Meso_3208 hypothetical protein                       K06997     225     112      31    0.267    217     
mes:Meso_0739 microcin-processing peptidase 2            K03568     471     111      31    0.236    326     
mes:Meso_1968 peptidase S10, serine carboxypeptidase                511     109      31    0.244    246     
mes:Meso_0044 GntR family transcriptional regulator                 445     102      29    0.259    297     
mes:Meso_0677 phenylalanyl-tRNA synthetase subunit beta  K01890     801     102      29    0.239    259     
mes:Meso_1536 malic enzyme (EC:1.1.1.39)                 K00029     770     102      29    0.285    158     
mes:Meso_1119 polyphosphate kinase (EC:2.7.4.1)          K00937     754     101      29    0.211    383     
mes:Meso_4568 hypothetical protein                                  385     100      29    0.268    190     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]