SSDB Paralog Search Result

KEGG ID :mfe:Mefer_1511 (473 a.a.)
Definition:Alpha-amylase (EC:3.2.1.1); K07405 alpha-amylase
Update status:T00976 (aah,abp,abv,adl,ahd,ahp,ahr,bamt,bans,bor,bpsd,bpsm,bpum,bsc,bsf,ccf,ccoi,ccy,cjer,clt,cmo,cput,ctec,ctfw,dav,dsq,echj,echl,echs,ecoh,fme,gbc,gbs,gtr,hcs,hct,hlr,hpyb,jag,koy,kpa,kps,lfp,lmoq,lmox,lmr,mdm,mlr,mrr,mtq,mtut,mtuu,npa,nvn,oas,paei,paeo,patr,pbc,pch,pco,pes,pfp,pmum,ppq,psq,rpj,rus,sagp,sauj,sauk,sauq,saut,sauv,sauw,saux,sauy,shs,sla,ssuy,tms,tpas,wse,yel,zmr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 14 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
mfe:Mefer_0661 SMC domain-containing protein             K03546    1007     129      35    0.224    156     
mfe:Mefer_0754 radical SAM protein                                  603     121      33    0.214    299     
mfe:Mefer_0868 chromosome segregation protein SMC        K03529    1169     121      33    0.214    318     
mfe:Mefer_0187 cobaltochelatase subunit CobN (EC:6.6.1.  K02230    1185     112      31    0.256    195     
mfe:Mefer_1288 hypothetical protein                                 688     110      31    0.200    476     
mfe:Mefer_1468 DNA-directed DNA polymerase (EC:2.7.7.7)  K02319    1647     110      31    0.223    367     
mfe:Mefer_0776 HsdR family type I site-specific deoxyri  K01153    1016     107      30    0.213    399     
mfe:Mefer_0049 reverse gyrase (EC:5.99.1.3)              K03170    1124     106      30    0.220    387     
mfe:Mefer_0400 hypothetical protein                                 353     104      30    0.259    147     
mfe:Mefer_0750 PP-loop domain-containing protein                    303     104      30    0.215    130     
mfe:Mefer_1181 hypothetical protein                                 295     104      30    0.295    176     
mfe:Mefer_1287 fibronectin-binding A domain-containing              671     102      29    0.284    141     
mfe:Mefer_1438 CRISPR-associated protein Cas1            K15342     322     101      29    0.264    144     
mfe:Mefer_1088 DNA polymerase II small subunit (EC:2.7.  K02323     592     100      29    0.273    128     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]