SSDB Paralog Search Result

KEGG ID :mia:OCU_03270 (343 a.a.)
Definition:hypothetical protein; K01971 DNA ligase (ATP)
Update status:T02158 (aal,ahp,ahr,asg,ble,bmet,bvt,cmn,cmo,ctes,dja,echj,echl,echs,elv,hcs,hct,hym,lfp,mcs,mdm,ngl,nvn,patr,pch,pmum,ppac,puf,rbc,rla,slv,tap,tcm,vir : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 7 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
mia:OCU_47940 hypothetical protein                                  422     927     217    0.462    325     
mia:OCU_29810 putative DNA ligase-like protein           K01971     296     558     133    0.385    291     
mia:OCU_09290 ATP-dependent DNA ligase (EC:6.5.1.1)      K01971     759     436     105    0.298    322     
mia:OCU_42080 hypothetical protein                                  530     107      30    0.272    147     
mia:OCU_43710 DNA-directed RNA polymerase subunit beta   K03046    1316     107      30    0.243    251     
mia:OCU_16500 regulatory protein LuxR                              1086     105      30    0.276    185     
mia:OCU_04800 DNA repair protein RadA                    K04485     470     100      29    0.263    224     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]