SSDB Paralog Search Result

KEGG ID :mid:MIP_05705 (509 a.a.)
Definition:DNA ligase; K01971 DNA ligase (ATP)
Update status:T02325 (amim,atr,bapf,bapg,bapu,bapw,bpsm,btra,btre,btrh,cmy,dav,ecoh,ecoo,hlr,myd,obr,pale,pes,psyr,ptg,rlb,rlu,slr,smir,sod,tcc,ths,tre : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 151 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
mid:MIP_01544 DNA ligase-like protein                    K01971     755     289      72    0.315    292     
mid:MIP_00682 DNA ligase                                 K01971     351     250      63    0.292    349     
mid:MIP_06333 Trehalose-phosphate phosphatase            K01087     380     170      45    0.280    372     
mid:MIP_05421 smf family protein                         K04096     389     146      39    0.290    183     
mid:MIP_02793 sulfite reductase [NADPH] flavoprotein al  K00380     543     141      38    0.249    366     
mid:MIP_06163 cation-transporting P-type ATPase C        K12950     738     140      38    0.236    564     
mid:MIP_06431 protein essC                               K03466    1229     140      38    0.245    253     
mid:MIP_07612 aldehyde dehydrogenase                     K00128     476     139      38    0.237    287     
mid:MIP_02870 nitrate reductase                                    1413     136      37    0.268    321     
mid:MIP_02879 ABC transporter                            K16786..   654     135      37    0.229    358     
mid:MIP_07643 cation-transporting ATPase I               K12955    1610     135      37    0.294    306     
mid:MIP_04096 linear gramicidin synthetase subunit C              10412     134      36    0.229    537     
mid:MIP_02544 gamma-glutamyl phosphate reductase         K00147     405     132      36    0.221    258     
mid:MIP_06043 ATP-dependent DNA helicase pcrA            K03657    1115     126      35    0.281    384     
mid:MIP_04171 transcriptional regulator                             868     125      34    0.255    400     
mid:MIP_07442 dihydrodipicolinate reductase, N-terminus             358     124      34    0.270    252     
mid:MIP_02110 hypothetical protein                                  190     123      34    0.282    202     
mid:MIP_05582 cystathionine gamma-lyase                  K01758     368     123      34    0.271    269     
mid:MIP_07351 hypothetical protein                                  572     121      33    0.257    373     
mid:MIP_00852 D-alanyl-D-alanine carboxypeptidase dacB   K07259     450     120      33    0.229    406     
mid:MIP_02225 ATP-dependent helicase dinG -like protein  K03722     675     120      33    0.297    158     
mid:MIP_05314 cobyrinic acid A,C-diamide synthase        K02224     457     120      33    0.254    311     
mid:MIP_06254 phospho manno mutase                       K01840     527     120      33    0.275    273     
mid:MIP_07424 Regulatory protein, TetR                              736     120      33    0.265    309     
mid:MIP_05880 NADH-quinone oxidoreductase subunit G      K00336     804     119      33    0.254    394     
mid:MIP_04141 cation-transporting P-type ATPase C                   760     118      33    0.222    568     
mid:MIP_04146 cation-transporting ATPase G               K12954     773     118      33    0.250    500     
mid:MIP_06567 cation-transporting P-type ATPase C                   747     118      33    0.231    567     
mid:MIP_01963 Mycocerosic acid synthase                  K12432    2120     117      33    0.248    383     
mid:MIP_02127 hypothetical protein                                  873     116      32    0.288    274     
mid:MIP_02639 dihydrodipicolinate reductase, N-terminus             351     116      32    0.267    296     
mid:MIP_04325 macrolide ABC transporter ATP-binding pro             619     116      32    0.246    492     
mid:MIP_01611 Molybdopterin biosynthesis protein moeA 1  K03750     429     115      32    0.247    239     
mid:MIP_01721 enolase                                    K01689     430     115      32    0.266    394     
mid:MIP_02248 ABC transporter ATP-binding protein        K14699     581     115      32    0.250    352     
mid:MIP_06287 N-acetylglucosamine-6-phosphate deacetyla  K01443     375     115      32    0.249    350     
mid:MIP_07014 cation-transporting ATPase I                         1479     115      32    0.228    290     
mid:MIP_02181 ATP synthase subunit b                     K02109     177     114      32    0.297    118     
mid:MIP_02372 Fatty acid synthase subunit beta           K11533    3084     114      32    0.245    371     
mid:MIP_03262 hypothetical protein                                  871     114      32    0.303    277     
mid:MIP_04971 hypothetical protein                       K07250     447     114      32    0.265    200     
mid:MIP_02813 linear gramicidin synthetase subunit D     K04792    1479     113      32    0.253    273     
mid:MIP_03988 hypothetical protein                                  719     113      32    0.277    256     
mid:MIP_04723 regulatory protein                                    934     113      32    0.250    240     
mid:MIP_07201 TetR family transcriptional regulator                 210     113      32    0.290    176     
mid:MIP_01259 pyruvate dehydrogenase E1 component subun  K00161     298     112      31    0.273    289     
mid:MIP_04345 acetylornithine amino transferase          K00818     400     112      31    0.273    253     
mid:MIP_04355 adenylate and guanylate cyclase catalytic             306     112      31    0.265    257     
mid:MIP_05502 DAK2 domain-containing protein             K07030     566     112      31    0.248    319     
mid:MIP_07090 phosphoribosylglycinamide formyl transfer  K08289     398     112      31    0.246    353     
mid:MIP_04548 L-asparaginase                             K01424     314     111      31    0.264    212     
mid:MIP_06644 PE family protein                                     248     111      31    0.307    127     
mid:MIP_07275 Sirohydrochlorin cobalto chelatase, putat             253     111      31    0.300    207     
mid:MIP_05031 3-carboxy-cis,cis-muconate cycloisomerase  K01857     408     110      31    0.253    300     
mid:MIP_06151 Modification methylase Eco57IB                        532     110      31    0.307    176     
mid:MIP_06194 3-oxosteroid 1-dehydrogenase               K03524     274     110      31    0.292    226     
mid:MIP_01451 hypothetical protein                                  752     109      31    0.236    424     
mid:MIP_04725 regulatory protein                                    907     109      31    0.267    329     
mid:MIP_04829 Fmu protein                                K03500     480     109      31    0.266    237     
mid:MIP_06044 Helicase, UvrD/Rep family protein                    1041     109      31    0.252    361     
mid:MIP_00846 hypothetical protein                                  416     108      30    0.302    212     
mid:MIP_01717 transcription-repair coupling factor       K03723    1226     108      30    0.267    255     
mid:MIP_02522 Folylpolyglutamate synthase                K11754     489     108      30    0.260    181     
mid:MIP_03884 PPE family protein                                    251     108      30    0.248    254     
mid:MIP_04334 Erythronolide synthase, modules 3 and 4              2131     108      30    0.241    427     
mid:MIP_04337 Erythronolide synthase, modules 3 and 4    K12434    2130     108      30    0.265    355     
mid:MIP_04570 linear gramicidin synthetase subunit C               8257     108      30    0.263    251     
mid:MIP_00830 ATP-dependent rna helicase, dead/deah box  K06877     777     107      30    0.282    181     
mid:MIP_01258 LAO/AO transport system ATPase             K07588     295     107      30    0.251    334     
mid:MIP_02057 ATPase                                     K06860    1137     107      30    0.268    325     
mid:MIP_02583 DNA polymerase III subunit delta           K02340     323     107      30    0.256    266     
mid:MIP_03269 dimodular nonribosomal peptide synthetase            5944     107      30    0.246    171     
mid:MIP_03867 PPE family protein                                    399     107      30    0.305    236     
mid:MIP_05125 protoporphyrinogen oxidase                 K00231     435     107      30    0.272    246     
mid:MIP_06035 DNA helicase II -like protein              K03657     702     107      30    0.269    171     
mid:MIP_00862 PPE family protein                                    412     106      30    0.280    353     
mid:MIP_02390 hypothetical protein                                 1162     106      30    0.257    334     
mid:MIP_03550 S-adenosyl-L-methionine-dependent methyl              307     106      30    0.253    257     
mid:MIP_05270 2-nitropropane dioxygenase                 K00459     341     106      30    0.317    139     
mid:MIP_05364 type-1 glutamine synthetase 2              K01915     461     106      30    0.250    296     
mid:MIP_05464 cell division protein ftsY -like protein   K03110     443     106      30    0.322    118     
mid:MIP_06879 hypothetical protein                                  853     106      30    0.250    272     
mid:MIP_03011 cytochrome P450 140                                   425     105      30    0.278    108     
mid:MIP_03071 glycerol-3-phosphate dehydrogenase 1       K00111     506     105      30    0.263    228     
mid:MIP_04288 channel-forming protein                               314     105      30    0.244    197     
mid:MIP_05245 pyruvate carboxylase                                 1075     105      30    0.275    327     
mid:MIP_05866 aminoglycoside phospho transferase                    462     105      30    0.271    214     
mid:MIP_06482 efflux ABC transporter permease            K02004     838     105      30    0.302    139     
mid:MIP_00316 phosphoenol pyruvate synthase              K01007     534     104      30    0.232    237     
mid:MIP_00508 oxidoreductase C10orf33 -like protein                 528     104      30    0.256    246     
mid:MIP_01591 hypothetical protein                                  569     104      30    0.238    366     
mid:MIP_02847 hypothetical protein                                  658     104      30    0.233    313     
mid:MIP_03378 Erythronolide synthase, modules 3 and 4    K12436    4178     104      30    0.252    503     
mid:MIP_03726 trans-carveol dehydrogenase                           267     104      30    0.273    220     
mid:MIP_04125 cation-transporting ATPase V               K12956     772     104      30    0.246    232     
mid:MIP_04331 oleandomycin polyketide synthase, modules            1032     104      30    0.223    448     
mid:MIP_04606 transposase                                           557     104      30    0.274    354     
mid:MIP_06242 glycerol-3-phosphate dehydrogenase 2       K00111     570     104      30    0.250    332     
mid:MIP_06451 hypothetical protein                                  282     104      30    0.254    224     
mid:MIP_01154 MCE-family protein Mce2A                   K02067     387     103      29    0.238    286     
mid:MIP_02093 NADH dehydrogenase                                    278     103      29    0.291    179     
mid:MIP_02743 Copper-containing nitrite reductase        K00368     864     103      29    0.252    452     
mid:MIP_03232 hypothetical protein                       K05810     228     103      29    0.305    95      
mid:MIP_03750 Nonspecific lipid-transfer protein                    400     103      29    0.218    188     
mid:MIP_04351 phenylalanyl-tRNA synthetase subunit beta  K01890     828     103      29    0.221    452     
mid:MIP_04520 transcriptional regulatory protein ptsJ               442     103      29    0.291    213     
mid:MIP_04866 oxidoreductase/HEAT repeat-containing pro             904     103      29    0.226    283     
mid:MIP_00907 DNA repair protein radA -like protein      K04485     470     102      29    0.282    181     
mid:MIP_00927 ABC transporter ATP-binding protein        K02077     300     102      29    0.240    262     
mid:MIP_01745 PPE family protein                                    384     102      29    0.265    200     
mid:MIP_03224 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate  K01925     479     102      29    0.305    302     
mid:MIP_03259 hypothetical protein                                  885     102      29    0.292    257     
mid:MIP_06167 S-adenosyl-L-methionine-dependent methyl              304     102      29    0.213    305     
mid:MIP_06398 ribosomal-protein-alanine acetyl transfer  K01409     341     102      29    0.249    245     
mid:MIP_06826 hypothetical protein                                  573     102      29    0.242    285     
mid:MIP_07155 hypothetical protein                                  473     102      29    0.265    310     
mid:MIP_01999 hypothetical protein                                  676     101      29    0.277    292     
mid:MIP_02171 peptide chain release factor 1             K02835     357     101      29    0.305    141     
mid:MIP_03055 hypothetical protein                                  567     101      29    0.285    207     
mid:MIP_03274 phthioceranic/hydroxyphthioceranic acid s  K12433    2116     101      29    0.253    352     
mid:MIP_05061 hypothetical protein                                  261     101      29    0.259    170     
mid:MIP_05637 isopentenyl-diphosphate delta-isomerase    K01823     351     101      29    0.265    189     
mid:MIP_05663 siderophore-binding lipoprotein yfiY       K02016     372     101      29    0.277    188     
mid:MIP_05759 phosphoglucomutase                         K01835     547     101      29    0.238    273     
mid:MIP_05847 PPE family protein                                    362     101      29    0.270    178     
mid:MIP_06228 ATP-dependent helicase lhr                 K03724    1534     101      29    0.250    212     
mid:MIP_06346 hypothetical protein                       K14161     523     101      29    0.274    277     
mid:MIP_06432 hypothetical protein                                  469     101      29    0.265    223     
mid:MIP_06731 exodeoxyribonuclease V subunit gamma       K03583    1100     101      29    0.265    253     
mid:MIP_07123 hypothetical protein                                  303     101      29    0.251    227     
mid:MIP_07250 hypothetical protein                                  451     101      29    0.259    278     
mid:MIP_07318 PPE family protein                                    456     101      29    0.263    240     
mid:MIP_07515 hypothetical protein                                  296     101      29    0.287    209     
mid:MIP_07693 Cation-transporting P-type ATPase A        K17686     756     101      29    0.248    306     
mid:MIP_00781 hypothetical protein                       K01738     368     100      29    0.254    232     
mid:MIP_00822 hypothetical protein                                  353     100      29    0.304    207     
mid:MIP_01572 hypothetical protein                                  466     100      29    0.242    194     
mid:MIP_01708 UDP-N-acetylglucosamine pyrophosphorylase  K04042     493     100      29    0.245    327     
mid:MIP_02580 Competence protein                         K02238     501     100      29    0.302    159     
mid:MIP_02594 hypothetical protein                                  232     100      29    0.299    197     
mid:MIP_03080 malonyl CoA-acyl carrier protein transacy  K00645     302     100      29    0.265    249     
mid:MIP_03219 UDP-N-acetylmuramoylalanyl-D-glutamate--2  K01928     527     100      29    0.224    447     
mid:MIP_04292 DNA repair protein recN                    K03631     588     100      29    0.255    267     
mid:MIP_04475 histidinol dehydrogenase                   K00013     467     100      29    0.259    228     
mid:MIP_04481 L-aspartate oxidase                        K00278     526     100      29    0.249    177     
mid:MIP_04810 UvrABC system protein C                    K03703     636     100      29    0.228    307     
mid:MIP_04974 Long-chain-fatty-acid--CoA ligase 5        K12421    1174     100      29    0.253    194     
mid:MIP_05135 hypothetical protein                                  147     100      29    0.273    128     
mid:MIP_06982 Molybdopterin biosynthesis protein moeA 2  K03750     401     100      29    0.249    241     
mid:MIP_07313 hypothetical protein                       K16648    1402     100      29    0.258    236     
mid:MIP_07722 Isovaleryl-CoA dehydrogenase 1                        741     100      29    0.243    519     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]