SSDB Paralog Search Result

KEGG ID :mif:Metin_0052 (388 a.a.)
Definition:ATP dependent DNA ligase; K07468 putative ATP-dependent DNA ligase
Update status:T01234 (abp,abv,adl,bamt,bans,bor,bpsd,bpsm,bpum,bsc,bsf,ccf,ccoi,ccy,clt,cput,ctec,ctfw,dav,dsq,ecoh,fme,gbc,gbs,gtr,hlr,hpyb,jag,kpa,kps,lmoq,lmox,lmr,mlr,mrr,mtq,mtut,mtuu,npa,oas,paei,paeo,pbc,pco,pes,pfp,ppq,psq,rpj,rus,sauj,sauk,sauq,saut,sauv,sauw,saux,sauy,shs,sla,ssuy,tms,wse,yel,zmr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 23 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
mif:Metin_1044 hypothetical protein                      K09718     368     134      36    0.260    262     
mif:Metin_0812 NurA domain protein                                  383     133      36    0.287    237     
mif:Metin_1237 DNA helicase                                         639     129      35    0.238    303     
mif:Metin_1069 chromosome segregation protein SMC        K03529    1142     124      34    0.208    365     
mif:Metin_0813 SMC domain protein                        K03546     873     119      33    0.212    397     
mif:Metin_0461 DNA-directed DNA polymerase (EC:2.7.7.7)  K02323     560     113      32    0.231    324     
mif:Metin_0230 methyl-accepting chemotaxis sensory tran  K03406     613     112      31    0.229    358     
mif:Metin_0375 TPR repeat-containing protein                        535     111      31    0.260    250     
mif:Metin_0250 DEAD/DEAH box helicase domain protein     K06877     857     109      31    0.237    337     
mif:Metin_1361 methyl-accepting chemotaxis sensory tran  K03406     556     108      30    0.271    218     
mif:Metin_0460 DNA primase, large subunit                K02685     336     107      30    0.243    292     
mif:Metin_0897 adenylyl cyclase CyaB                     K05873     171     107      30    0.239    109     
mif:Metin_1433 hypothetical protein                      K09724     473     106      30    0.241    369     
mif:Metin_0289 anthranilate phosphoribosyltransferase (  K00766     332     105      30    0.195    303     
mif:Metin_0333 Fibronectin-binding A domain protein                 666     104      30    0.236    326     
mif:Metin_0939 CoA-binding domain protein                K09181     667     104      30    0.213    343     
mif:Metin_1246 DNA polymerase Pol2 (EC:2.7.7.7)          K02319     757     104      30    0.246    252     
mif:Metin_0924 CRISPR-associated autoregulator, DevR fa             365     103      29    0.223    332     
mif:Metin_0166 CRISPR-associated protein, Csx11 family             1203     102      29    0.234    367     
mif:Metin_0340 anaerobic ribonucleoside-triphosphate re  K00527     779     102      29    0.223    229     
mif:Metin_0816 aspartyl-tRNA(Asn) amidotransferase, B s  K03330     628     102      29    0.257    230     
mif:Metin_0801 DNA ligase I, ATP-dependent Dnl1 (EC:6.5  K10747     565     100      29    0.225    298     
mif:Metin_0940 Pre-mRNA processing ribonucleoprotein, b  K14564     389     100      29    0.226    195     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]