SSDB Paralog Search Result

KEGG ID :mir:OCQ_09380 (755 a.a.)
Definition:ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD
Update status:T01755 (abat,aoa,biu,bmay,bmec,boe,bpsl,bsem,bstg,bxi,cann,ccaj,ccan,cceu,cdip,cdk,cell,cfj,cfk,cman,csem,cser,cyi,eai,ecls,epz,fox,fvr,ghi,glz,keu,lvs,nai,ndv,nsd,nta,ocm,ome,opf,pazo,pcon,psco,pswu,pvr,rbb,rbp,rss,snw,strd,sulf,sure,synw,tci,tum,tvs,zju : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Threshold:
  

Search Result : 7 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
mir:OCQ_30560 putative DNA ligase-like protein          K01971     296      599 (    -)     142    0.344    288      -> 
mir:OCQ_30550 DNA polymerase LigD ligase subunit                   332      590 (    -)     140    0.399    318      -> 
mir:OCQ_49030 hypothetical protein                                 422      476 (    -)     114    0.300    330      -> 
mir:OCQ_03210 hypothetical protein                                 343      435 (    -)     105    0.298    322      -> 
mir:OCQ_03200 ATP-dependent DNA ligase                             351      334 (    -)      82    0.307    339      -> 
mir:OCQ_38860 ATP-dependent DNA ligase                  K10747     509      289 (    -)      72    0.315    292      -> 
mir:OCQ_40840 hypothetical protein                                 178      103 (    -)      29    0.311    90       -> 

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]