SSDB Paralog Search Result

KEGG ID :mir:OCQ_09380 (755 a.a.)
Definition:ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD
Update status:T01755 (aalg,acin,acip,acis,aeo,ahg,aht,aoa,apak,boe,boh,bsan,cez,cspf,ctae,cup,efv,fha,hcq,hyz,labr,leq,maur,mphy,mza,nsi,para,pdh,pea,pmad,pros,pstw,psya,sauo,sja,slz,sphj,spht,spkc,spse,sten,tab,vff,vne : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Threshold:
  

Search Result : 7 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
mir:OCQ_30560 putative DNA ligase-like protein          K01971     296      599 (    -)     142    0.344    288      -> 
mir:OCQ_30550 DNA polymerase LigD ligase subunit                   332      590 (    -)     140    0.399    318      -> 
mir:OCQ_49030 hypothetical protein                                 422      476 (    -)     114    0.300    330      -> 
mir:OCQ_03210 hypothetical protein                                 343      435 (    -)     105    0.298    322      -> 
mir:OCQ_03200 ATP-dependent DNA ligase                             351      334 (    -)      82    0.307    339      -> 
mir:OCQ_38860 ATP-dependent DNA ligase                  K10747     509      289 (    -)      72    0.315    292      -> 
mir:OCQ_40840 hypothetical protein                                 178      103 (    -)      29    0.311    90       -> 

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]