SSDB Paralog Search Result

KEGG ID :mkm:Mkms_1846 (520 a.a.)
Definition:ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP)
Update status:T00442 (amim,atr,bapf,bapg,bapu,bapw,bpsm,btra,btre,btrh,cmy,dav,ecoh,ecoo,hlr,myd,obr,pale,pes,psyr,ptg,rlb,rlu,slr,smir,sod,tcc,ths,tre : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
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Search Result : 233 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
mkm:Mkms_5930 DNA ligase (ATP) (EC:6.5.1.1)              K01971     329     333      82    0.294    310     
mkm:Mkms_4438 ATP-dependent DNA ligase (EC:6.5.1.1)      K01971     758     328      81    0.292    370     
mkm:Mkms_5557 DNA ligase (ATP) (EC:6.5.1.1)              K01971     328     321      79    0.284    327     
mkm:Mkms_5027 ATP-dependent DNA ligase (EC:6.5.1.1)      K01971     353     297      74    0.287    348     
mkm:Mkms_5005 ATP-dependent DNA ligase (EC:6.5.1.1)      K01971     353     296      73    0.273    337     
mkm:Mkms_4864 D-alanyl-D-alanine carboxypeptidase/D-ala  K07259     462     168      44    0.256    375     
mkm:Mkms_1528 aminoglycoside phosphotransferase                     358     146      39    0.310    158     
mkm:Mkms_4111 hypothetical protein                                 1351     144      39    0.251    402     
mkm:Mkms_2557 aminoglycoside phosphotransferase                     667     142      38    0.272    334     
mkm:Mkms_3611 gamma-glutamyl phosphate reductase (EC:1.  K00147     415     142      38    0.260    384     
mkm:Mkms_1907 hypothetical protein                                  412     140      38    0.302    288     
mkm:Mkms_0206 aldehyde dehydrogenase                                525     139      38    0.235    379     
mkm:Mkms_3006 acyl-CoA synthetase (EC:2.3.1.86)          K03822    1005     137      37    0.268    265     
mkm:Mkms_0521 iron-containing alcohol dehydrogenase                 401     136      37    0.275    287     
mkm:Mkms_2516 hypothetical protein                                  445     136      37    0.251    415     
mkm:Mkms_1284 DEAD/DEAH box helicase                     K03724    1523     135      37    0.256    586     
mkm:Mkms_2993 DNA repair protein RecN                    K03631     590     135      37    0.285    376     
mkm:Mkms_3317 UDP-N-acetylmuramate--L-alanine ligase (E  K01924     484     133      36    0.332    232     
mkm:Mkms_3434 FAD dependent oxidoreductase               K00111     518     132      36    0.270    396     
mkm:Mkms_4008 hypothetical protein                                  877     132      36    0.261    541     
mkm:Mkms_5956 Fis family transcriptional regulator                  534     132      36    0.237    426     
mkm:Mkms_3530 acyl transferase domain-containing protei  K04791     978     131      36    0.258    473     
mkm:Mkms_0453 LuxR family transcriptional regulator                 845     130      35    0.254    519     
mkm:Mkms_1249 thymidine phosphorylase (EC:2.4.2.4)       K00758     448     130      35    0.276    257     
mkm:Mkms_3426 (acyl-carrier-protein) S-malonyltransfera  K00645     314     129      35    0.280    239     
mkm:Mkms_0459 hypothetical protein                                  611     128      35    0.278    395     
mkm:Mkms_0854 ATP-dependent DNA ligase-like protein                 214     127      35    0.268    127     
mkm:Mkms_3179 acyl transferase domain-containing protei  K12433    2085     126      35    0.263    396     
mkm:Mkms_3300 signal transduction histidine kinase regu             539     126      35    0.270    230     
mkm:Mkms_5674 heavy metal translocating P-type ATPase    K01534     851     126      35    0.245    257     
mkm:Mkms_5937 hypothetical protein                                  457     126      35    0.255    298     
mkm:Mkms_1551 virulence factor Mce family protein        K02067     380     125      34    0.238    403     
mkm:Mkms_5012 regulatory protein LuxR                               937     125      34    0.258    485     
mkm:Mkms_3090 putative signal transduction histidine ki             381     124      34    0.252    317     
mkm:Mkms_3721 fatty acid synthase (EC:2.3.1.-)           K11533    3077     124      34    0.240    421     
mkm:Mkms_0387 putative DNA-binding protein                          314     123      34    0.264    265     
mkm:Mkms_1572 putative ABC transporter                              586     123      34    0.243    510     
mkm:Mkms_5488 hypothetical protein                                  809     123      34    0.238    474     
mkm:Mkms_0849 ADP-ribosylation/crystallin J1                        698     122      34    0.240    559     
mkm:Mkms_1388 LuxR family transcriptional regulator                 881     122      34    0.359    145     
mkm:Mkms_2259 protoporphyrinogen oxidase (EC:1.3.3.4)    K00231     451     122      34    0.287    164     
mkm:Mkms_3174 transport protein                                    1062     122      34    0.220    410     
mkm:Mkms_3703 carbamoyl-phosphate synthase subunit L     K11263     662     122      34    0.272    324     
mkm:Mkms_1728 fumarate lyase                             K01857     401     121      33    0.292    264     
mkm:Mkms_1744 fumarate lyase                             K01857     401     121      33    0.292    264     
mkm:Mkms_4571 hypothetical protein                                  764     121      33    0.247    469     
mkm:Mkms_5388 ABC transporter-like protein                          553     121      33    0.278    187     
mkm:Mkms_5435 D-isomer specific 2-hydroxyacid dehydroge             344     121      33    0.267    251     
mkm:Mkms_3850 restriction endonuclease S subunits-like   K01154     419     120      33    0.235    366     
mkm:Mkms_5851 putative nonspecific lipid-transfer prote             388     120      33    0.249    378     
mkm:Mkms_5888 hypothetical protein                                  587     120      33    0.261    291     
mkm:Mkms_1682 virulence factor Mce family protein        K02067     379     119      33    0.250    400     
mkm:Mkms_3448 hypothetical protein                                  568     119      33    0.249    461     
mkm:Mkms_5097 carboxyl transferase                                  516     119      33    0.274    303     
mkm:Mkms_1204 hypothetical protein                                  430     118      33    0.246    415     
mkm:Mkms_1427 UvrD/REP helicase                          K03657     707     118      33    0.243    441     
mkm:Mkms_3098 ABC transporter, transmembrane region, ty  K16012     509     118      33    0.287    366     
mkm:Mkms_3176 hypothetical protein                                  461     118      33    0.266    354     
mkm:Mkms_3367 nicotinate-nucleotide--dimethylbenzimidaz  K00768     350     118      33    0.349    149     
mkm:Mkms_3525 hypothetical protein                                  476     118      33    0.244    283     
mkm:Mkms_1285 short-chain dehydrogenase/reductase SDR               263     117      33    0.256    254     
mkm:Mkms_1421 UvrD/REP helicase                                    1051     117      33    0.260    531     
mkm:Mkms_3194 vesicle-fusing ATPase (EC:3.6.4.6)         K13527     615     117      33    0.249    305     
mkm:Mkms_4375 molybdenum cofactor synthesis domain-cont  K03750     419     117      33    0.259    201     
mkm:Mkms_5743 heavy metal translocating P-type ATPase               655     117      33    0.320    181     
mkm:Mkms_1975 D-alanyl-alanine synthetase A (EC:6.3.2.4  K01921     371     116      32    0.301    206     
mkm:Mkms_4386 integral membrane sensor signal transduct  K07653     515     116      32    0.255    278     
mkm:Mkms_5290 hypothetical protein                                  481     116      32    0.258    326     
mkm:Mkms_0089 PTS system fructose subfamily transporter  K02768..   671     115      32    0.231    212     
mkm:Mkms_0436 hypothetical protein                                  430     115      32    0.249    417     
mkm:Mkms_1140 hypothetical protein                                  457     115      32    0.256    285     
mkm:Mkms_1192 hypothetical protein                       K14161     529     115      32    0.286    231     
mkm:Mkms_1796 hypothetical protein                                  709     115      32    0.269    342     
mkm:Mkms_2137 peptidase S15                              K06978     551     115      32    0.267    277     
mkm:Mkms_2368 hypothetical protein                                  885     115      32    0.275    298     
mkm:Mkms_2862 hypothetical protein                                  685     115      32    0.238    390     
mkm:Mkms_3535 beta-ketoacyl synthase                     K15320    1704     115      32    0.258    279     
mkm:Mkms_4183 exodeoxyribonuclease VII large subunit (E  K03601     411     115      32    0.249    377     
mkm:Mkms_4407 hypothetical protein                                  472     115      32    0.266    192     
mkm:Mkms_5043 penicillin-binding protein, transpeptidas             586     115      32    0.284    415     
mkm:Mkms_1256 NLP/P60 protein                                       362     114      32    0.283    233     
mkm:Mkms_4772 2-nitropropane dioxygenase                            356     114      32    0.238    239     
mkm:Mkms_4950 hypothetical protein                                  449     114      32    0.282    262     
mkm:Mkms_0092 phosphoenolpyruvate--protein phosphotrans  K08483     584     113      32    0.253    383     
mkm:Mkms_2297 glutamine amidotransferase subunit PdxT    K08681     206     113      32    0.284    169     
mkm:Mkms_3346 purine catabolism PurC domain-containing   K09684     492     113      32    0.297    283     
mkm:Mkms_3468 alcohol dehydrogenase                      K13953     347     113      32    0.314    153     
mkm:Mkms_5436 6-phosphogluconate dehydrogenase           K00042     305     113      32    0.299    157     
mkm:Mkms_0056 hypothetical protein                                  666     112      31    0.230    417     
mkm:Mkms_0669 ROK family protein                                    436     112      31    0.251    363     
mkm:Mkms_1493 heavy metal translocating P-type ATPase               723     112      31    0.222    501     
mkm:Mkms_2093 penicillin-binding protein, transpeptidas             606     112      31    0.246    248     
mkm:Mkms_2445 hypothetical protein                       K09762     325     112      31    0.301    219     
mkm:Mkms_2541 cobaltochelatase subunit CobN (EC:6.6.1.2  K02230    1198     112      31    0.237    308     
mkm:Mkms_3494 ABC transporter-like protein               K16786..   682     112      31    0.265    388     
mkm:Mkms_4167 hypothetical protein                                  981     112      31    0.257    439     
mkm:Mkms_5278 acyl-CoA dehydrogenase domain-containing              385     112      31    0.319    185     
mkm:Mkms_6009 pyruvate ferredoxin/flavodoxin oxidoreduc  K00179     563     112      31    0.274    285     
mkm:Mkms_0179 hypothetical protein                                  442     111      31    0.305    141     
mkm:Mkms_2004 PII uridylyl-transferase (EC:2.7.7.59)     K00990     837     111      31    0.262    294     
mkm:Mkms_2415 orotidine 5'-phosphate decarboxylase (EC:  K01591     272     111      31    0.288    233     
mkm:Mkms_5643 putative nonspecific lipid-transfer prote             388     111      31    0.243    378     
mkm:Mkms_0437 LuxR family transcriptional regulator                 544     110      31    0.327    159     
mkm:Mkms_2828 alcohol dehydrogenase                                 343     110      31    0.306    124     
mkm:Mkms_4456 amidohydrolase 3                           K07047     548     110      31    0.262    393     
mkm:Mkms_4869 aldehyde dehydrogenase                     K14519     530     110      31    0.300    160     
mkm:Mkms_4955 putative glutamate synthase (NADPH) small             559     110      31    0.255    388     
mkm:Mkms_5168 amine oxidase                              K09879     506     110      31    0.311    228     
mkm:Mkms_5576 hypothetical protein                                  589     110      31    0.270    263     
mkm:Mkms_1363 hypothetical protein                                  246     109      31    0.254    173     
mkm:Mkms_2863 hypothetical protein                                  450     109      31    0.306    157     
mkm:Mkms_5938 hypothetical protein                                  238     109      31    0.341    85      
mkm:Mkms_2010 type 11 methyltransferase                             212     108      30    0.286    245     
mkm:Mkms_4704 virulence factor Mce family protein        K02067     344     108      30    0.289    114     
mkm:Mkms_5486 metal dependent phosphohydrolase           K00970     489     108      30    0.253    257     
mkm:Mkms_0112 Na+/H+ antiporter                          K03316     535     107      30    0.259    197     
mkm:Mkms_1999 condensin subunit Smc                      K03529    1195     107      30    0.297    209     
mkm:Mkms_2401 3-dehydroquinate synthase (EC:4.2.3.4)     K01735     360     107      30    0.275    280     
mkm:Mkms_2467 carbohydrate kinase                        K00854     494     107      30    0.258    194     
mkm:Mkms_2605 dihydroxyacetone kinase (EC:2.7.1.29)      K00863     581     107      30    0.266    289     
mkm:Mkms_3529 amino acid adenylation domain-containing   K04789    1745     107      30    0.252    333     
mkm:Mkms_4789 LysR family transcriptional regulator                 317     107      30    0.310    229     
mkm:Mkms_4798 acyl-CoA dehydrogenase domain-containing              717     107      30    0.265    437     
mkm:Mkms_5054 ABC transporter-like protein               K05847     369     107      30    0.294    262     
mkm:Mkms_0254 beta-ketoacyl synthase                               3693     106      30    0.250    376     
mkm:Mkms_0773 hypothetical protein                                 1488     106      30    0.266    335     
mkm:Mkms_1295 group 1 glycosyl transferase                          408     106      30    0.252    270     
mkm:Mkms_1694 putative nonspecific lipid-transfer prote             388     106      30    0.241    378     
mkm:Mkms_3320 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate  K01925     495     106      30    0.250    224     
mkm:Mkms_3958 glycosyl transferase family protein        K02851     399     106      30    0.286    241     
mkm:Mkms_4085 ABC transporter-like protein                          537     106      30    0.330    182     
mkm:Mkms_4592 FAD dependent oxidoreductase                          520     106      30    0.302    205     
mkm:Mkms_5040 hypothetical protein                                  578     106      30    0.258    295     
mkm:Mkms_0091 DeoR family transcriptional regulator      K03436     255     105      30    0.273    231     
mkm:Mkms_1409 alcohol dehydrogenase                                 310     105      30    0.270    226     
mkm:Mkms_2001 signal recognition particle-docking prote  K03110     466     105      30    0.288    236     
mkm:Mkms_2105 betaine-aldehyde dehydrogenase (EC:1.2.1.  K00130     455     105      30    0.272    169     
mkm:Mkms_2167 cell division protein FtsK                 K03466     870     105      30    0.319    182     
mkm:Mkms_2819 ATP-dependent protease La (EC:3.4.21.53)   K01338     783     105      30    0.282    291     
mkm:Mkms_2997 HAD family hydrolase                                  334     105      30    0.271    258     
mkm:Mkms_3097 ABC transporter, transmembrane region, ty  K16013     530     105      30    0.258    453     
mkm:Mkms_3149 RNA polymerase ECF-subfamily sigma factor  K03088     380     105      30    0.269    193     
mkm:Mkms_4295 osmosensitive K+ channel signal transduct  K07646     836     105      30    0.286    210     
mkm:Mkms_4419 succinate-semialdehyde dehydrogenase (NAD  K00135     482     105      30    0.205    200     
mkm:Mkms_5035 cytochrome P450                                       407     105      30    0.263    281     
mkm:Mkms_0073 ATPase central domain-containing protein              573     104      30    0.234    256     
mkm:Mkms_0186 long-chain-fatty-acid--CoA ligase (EC:2.3  K00666     506     104      30    0.304    273     
mkm:Mkms_0458 isoniazid inductible gene protein IniC                502     104      30    0.249    321     
mkm:Mkms_0486 hypothetical protein                                  247     104      30    0.222    212     
mkm:Mkms_0552 serine/threonine protein kinase            K14949     759     104      30    0.264    276     
mkm:Mkms_1434 SARP family transcriptional regulator                1141     104      30    0.271    399     
mkm:Mkms_1678 virulence factor Mce family protein        K02067     448     104      30    0.229    293     
mkm:Mkms_1841 propionyl-CoA carboxylase (EC:6.4.1.3)                498     104      30    0.273    267     
mkm:Mkms_2025 AMP-dependent synthetase and ligase                   830     104      30    0.278    273     
mkm:Mkms_2052 ribosomal RNA large subunit methyltransfe  K06941     374     104      30    0.237    278     
mkm:Mkms_2113 mycothione reductase (EC:1.8.1.7)          K17883     470     104      30    0.278    273     
mkm:Mkms_2855 peptidase M48, Ste24p                                 316     104      30    0.264    212     
mkm:Mkms_2879 beta-ketoacyl synthase                     K12441    1580     104      30    0.234    355     
mkm:Mkms_3414 glutamine--fructose-6-phosphate transamin  K00820     595     104      30    0.241    489     
mkm:Mkms_3507 hypothetical protein                                  663     104      30    0.274    186     
mkm:Mkms_3699 pyruvate dehydrogenase (EC:1.2.4.1)        K00161     356     104      30    0.286    182     
mkm:Mkms_4057 extracellular solute-binding protein       K02027     465     104      30    0.281    196     
mkm:Mkms_4109 LmbE family protein                        K15525     308     104      30    0.271    207     
mkm:Mkms_4400 putative magnesium chelatase               K03405     461     104      30    0.325    169     
mkm:Mkms_4741 integral membrane sensor signal transduct             431     104      30    0.286    325     
mkm:Mkms_5093 cell wall arabinan synthesis protein       K11386    1071     104      30    0.223    359     
mkm:Mkms_5122 prephenate dehydratase (EC:4.2.1.51)       K04518     315     104      30    0.286    199     
mkm:Mkms_5161 hypothetical protein                                  307     104      30    0.276    214     
mkm:Mkms_5300 short chain dehydrogenase                             348     104      30    0.364    143     
mkm:Mkms_0175 integral membrane sensor signal transduct             428     103      29    0.209    378     
mkm:Mkms_0236 hypothetical protein                       K16648    1384     103      29    0.242    355     
mkm:Mkms_0410 hypothetical protein                                  594     103      29    0.260    169     
mkm:Mkms_0502 carbon monoxide dehydrogenase, large subu  K03520     796     103      29    0.244    270     
mkm:Mkms_0557 glycine oxidase ThiO                       K03153     338     103      29    0.264    318     
mkm:Mkms_2084 deoxyribodipyrimidine photo-lyase type I   K01669     445     103      29    0.254    244     
mkm:Mkms_2088 1-deoxy-D-xylulose 5-phosphate reductoiso  K00099     392     103      29    0.255    341     
mkm:Mkms_2120 uroporphyrinogen-III C-methyltransferase   K02302     398     103      29    0.225    355     
mkm:Mkms_2265 hypothetical protein                                  257     103      29    0.298    131     
mkm:Mkms_2551 ATP-dependent DNA helicase RecQ            K03654     543     103      29    0.257    292     
mkm:Mkms_3929 helicase c2                                K03722     665     103      29    0.267    296     
mkm:Mkms_3988 hypothetical protein                                  531     103      29    0.297    239     
mkm:Mkms_4102 hypothetical protein                                  554     103      29    0.263    335     
mkm:Mkms_4737 acyl-CoA synthetase (EC:2.3.1.86)          K00666     501     103      29    0.259    313     
mkm:Mkms_5335 NAD-dependent epimerase/dehydratase                   322     103      29    0.284    268     
mkm:Mkms_5696 copper-translocating P-type ATPase         K01533     795     103      29    0.245    294     
mkm:Mkms_0441 hypothetical protein                                  603     102      29    0.275    229     
mkm:Mkms_0740 O-succinylbenzoic acid--CoA ligase (EC:6.  K01911     354     102      29    0.247    328     
mkm:Mkms_1332 UDP-N-acetylglucosamine 2-epimerase (EC:5  K01791     387     102      29    0.286    224     
mkm:Mkms_1505 glycosyl transferase family protein                   831     102      29    0.242    260     
mkm:Mkms_1535 CoA-binding domain-containing protein                 703     102      29    0.257    408     
mkm:Mkms_1937 aspartyl/glutamyl-tRNA amidotransferase s  K02433     495     102      29    0.276    210     
mkm:Mkms_1966 regulatory proteins IclR                              233     102      29    0.292    137     
mkm:Mkms_2024 acyl-CoA thioesterase                                 272     102      29    0.279    308     
mkm:Mkms_3441 response regulator receiver protein                   542     102      29    0.224    504     
mkm:Mkms_3465 RNA-binding S1 domain-containing protein   K06959     777     102      29    0.242    467     
mkm:Mkms_4630 virulence factor Mce family protein        K02067     399     102      29    0.250    316     
mkm:Mkms_4885 DEAD/DEAH box helicase                     K06877     775     102      29    0.256    528     
mkm:Mkms_5017 cytochrome P450                                       394     102      29    0.237    308     
mkm:Mkms_5593 hypothetical protein                                  849     102      29    0.284    176     
mkm:Mkms_0241 amidohydrolase 2                           K07045     391     101      29    0.237    355     
mkm:Mkms_0525 hypothetical protein                                  208     101      29    0.291    148     
mkm:Mkms_1095 heavy metal translocating P-type ATPase    K01552     774     101      29    0.271    288     
mkm:Mkms_1571 putative ABC transporter                              525     101      29    0.271    210     
mkm:Mkms_1888 allophanate hydrolase (EC:3.5.1.4)         K01457     578     101      29    0.250    216     
mkm:Mkms_2091 N-acetyltransferase GCN5                   K06976     284     101      29    0.328    125     
mkm:Mkms_3472 diacylglycerol O-acyltransferase (EC:2.3.             471     101      29    0.252    349     
mkm:Mkms_3970 homoserine dehydrogenase (EC:1.1.1.3)      K00003     445     101      29    0.259    270     
mkm:Mkms_4072 ABC transporter                            K01992     532     101      29    0.284    218     
mkm:Mkms_4083 ATPase AAA                                            690     101      29    0.285    253     
mkm:Mkms_4654 adenylosuccinate lyase (EC:4.3.2.2)        K01756     475     101      29    0.287    237     
mkm:Mkms_5502 hypothetical protein                                  675     101      29    0.264    216     
mkm:Mkms_0239 beta-N-acetylhexosaminidase (EC:3.2.1.52)  K01207     401     100      29    0.248    327     
mkm:Mkms_0348 hypothetical protein                                  492     100      29    0.279    140     
mkm:Mkms_0376 acyl-CoA dehydrogenase domain-containing              730     100      29    0.244    254     
mkm:Mkms_1195 inosine/uridine-preferring nucleoside hyd             349     100      29    0.264    148     
mkm:Mkms_2175 UDP-glucuronosyl/UDP-glucosyltransferase              387     100      29    0.258    244     
mkm:Mkms_2208 tRNA delta(2)-isopentenylpyrophosphate tr  K00791     305     100      29    0.258    271     
mkm:Mkms_2320 gamma-aminobutyraldehyde dehydrogenase     K00130     477     100      29    0.249    189     
mkm:Mkms_2534 precorrin-3B synthase                      K02229     373     100      29    0.276    192     
mkm:Mkms_2832 xylulokinase                                          493     100      29    0.281    288     
mkm:Mkms_3411 cobalamin biosynthesis protein (EC:6.3.1.  K02227     344     100      29    0.284    201     
mkm:Mkms_3583 hypothetical protein                       K02340     320     100      29    0.339    112     
mkm:Mkms_3837 peptidase M24                                         377     100      29    0.304    230     
mkm:Mkms_3978 oxidoreductase domain-containing protein              324     100      29    0.240    317     
mkm:Mkms_4022 heavy metal translocating P-type ATPase    K17686     737     100      29    0.246    402     
mkm:Mkms_4475 LacI family transcriptional regulator      K02529     329     100      29    0.289    135     
mkm:Mkms_4874 hypothetical protein                                  426     100      29    0.270    267     
mkm:Mkms_4894 hypothetical protein                                  246     100      29    0.293    133     
mkm:Mkms_5077 cysteine desulfurase                                  398     100      29    0.247    283     
mkm:Mkms_5227 virulence factor Mce family protein        K02067     415     100      29    0.263    156     
mkm:Mkms_5667 peptidase M48, Ste24p                                 314     100      29    0.258    310     
mkm:Mkms_5893 helicase domain-containing protein                   1069     100      29    0.252    290     
mkm:Mkms_5925 hypothetical protein                                  561     100      29    0.245    367     

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