SSDB Paralog Search Result

KEGG ID :mkm:Mkms_4438 (758 a.a.)
Definition:ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD ligase module; K01971 bifunctional non-homologous end joining protein LigD
Update status:T00442 (agl,aoa,asq,avu,bcig,bgy,bhu,boe,btho,caby,hhsr,hsi,jaz,jeu,kba,mbf,myz,pmuc,suam,vhl,xho : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Threshold:
  

Search Result : 11 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
mkm:Mkms_5930 DNA ligase (ATP)                          K01971     329      606 (    -)     144    0.391    307      -> 
mkm:Mkms_5557 DNA ligase (ATP)                          K01971     328      518 (    -)     124    0.364    308      -> 
mkm:Mkms_5004 conserved hypothetical protein                       347      477 (    -)     115    0.310    342      -> 
mkm:Mkms_0370 conserved hypothetical protein                       434      459 (    -)     110    0.305    325      -> 
mkm:Mkms_5316 conserved hypothetical protein                       310      403 (    -)      98    0.339    251      -> 
mkm:Mkms_5005 ATP dependent DNA ligase                             353      390 (    -)      95    0.312    327      -> 
mkm:Mkms_1846 DNA ligase I, ATP-dependent Dnl1          K10747     520      328 (    -)      81    0.292    370      -> 
mkm:Mkms_5027 ATP dependent DNA ligase                             353      315 (    -)      78    0.302    334      -> 
mkm:Mkms_0854 ATP-dependent DNA ligase-like protein                214      287 (    -)      71    0.371    167      -> 
mkm:Mkms_5016 beta-lactamase domain protein                        308      101 (    -)      29    0.301    146      -> 
mkm:Mkms_5940 conserved hypothetical protein                       337      101 (    -)      29    0.313    83       -> 

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]