SSDB Paralog Search Result

KEGG ID :mmu:433759 (482 a.a.)
Definition:histone deacetylase 1 (EC:3.5.1.98); K06067 histone deacetylase 1/2
Update status:T01002 (amim,atr,bapf,bapg,bapu,bapw,bpsm,btra,btre,btrh,cmy,dav,ecoh,ecoo,hlr,myd,obr,pale,pes,psyr,ptg,rlb,rlu,slr,smir,sod,tcc,ths,tre : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
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Search Result : 206 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
mmu:15182 histone deacetylase 2 (EC:3.5.1.98)            K06067     488    2882     663    0.861    483     
mmu:15183 histone deacetylase 3 (EC:3.5.1.98)            K11404     428    1845     426    0.593    425     
mmu:70315 histone deacetylase 8 (EC:3.5.1.98)            K11405     377    1092     255    0.437    341     
mmu:79221 histone deacetylase 9 (EC:3.5.1.98)            K11409    1088     396      96    0.273    403     
mmu:208727 histone deacetylase 4 (EC:3.5.1.98)           K11406    1076     395      96    0.280    382     
mmu:56233 histone deacetylase 7 (EC:3.5.1.98)            K11408     953     387      94    0.282    305     
mmu:15185 histone deacetylase 6 (EC:3.5.1.98)            K11407    1149     378      92    0.273    308     
mmu:15184 histone deacetylase 5 (EC:3.5.1.98)            K11406    1115     377      92    0.298    285     
mmu:170787 histone deacetylase 10 (EC:3.5.1.98)          K11407     666     348      85    0.253    380     
mmu:232232 histone deacetylase 11 (EC:3.5.1.98)          K11418     347     298      74    0.281    288     
mmu:353326 retrotransposon-like 1                                  1744     159      42    0.234    239     
mmu:333329 cyclic nucleotide gated channel beta 1        K04952    1325     155      41    0.371    97      
mmu:78244 DnaJ (Hsp40) homolog, subfamily C, member 21   K09506     531     142      38    0.273    172     
mmu:74270 ubiquitin specific peptidase 20 (EC:3.4.19.12  K11848     916     138      37    0.271    214     
mmu:101739 PC4 and SFRS1 interacting protein 1                      528     136      37    0.328    116     
mmu:442809 RIKEN cDNA 4932416K20 gene                              1054     134      36    0.247    166     
mmu:55989 NOP58 ribonucleoprotein                        K14565     536     133      36    0.287    150     
mmu:17975 nucleolin                                      K11294     707     132      36    0.301    113     
mmu:16443 intersectin 1 (SH3 domain protein 1A)                    1213     130      35    0.302    96      
mmu:101056200 nuclear pore-associated protein 1-like               1151     129      35    0.322    90      
mmu:69870 polymerase (RNA) III (DNA directed) polypepti  K03024     218     128      35    0.273    150     
mmu:102636995 putative golgin subfamily A member 6-like             392     127      35    0.222    126     
mmu:102636589 high mobility group nucleosome-binding do             319     126      35    0.309    97      
mmu:102637764 retrotransposon-like protein 1-like                   185     126      35    0.267    101     
mmu:13602 SPARC-like 1                                              650     126      35    0.284    95      
mmu:17933 myelin transcription factor 1-like                       1187     125      34    0.275    120     
mmu:214111 solute carrier family 24 (sodium/potassium/c  K13749    1130     125      34    0.271    107     
mmu:50887 high-mobility group nucleosome binding domain  K17045     406     124      34    0.317    101     
mmu:18040 neurofilament, medium polypeptide              K04573     848     123      34    0.309    110     
mmu:21429 upstream binding transcription factor, RNA po  K09273     727     123      34    0.213    136     
mmu:29877 hepatoma-derived growth factor, related prote             202     123      34    0.265    155     
mmu:75339 M-phase phosphoprotein 8 (EC:2.4.2.30)                    858     123      34    0.270    137     
mmu:67920 MAK16 homolog (S. cerevisiae)                  K14831     296     122      34    0.285    137     
mmu:21969 topoisomerase (DNA) I (EC:5.99.1.2)            K03163     767     121      33    0.337    95      
mmu:434768 reproductive homeobox 8                                  320     120      33    0.299    87      
mmu:67407 cylicin, basic protein of sperm head cytoskel             640     120      33    0.257    105     
mmu:102636698 putative golgin subfamily A member 6-like             296     119      33    0.222    126     
mmu:11737 acidic (leucine-rich) nuclear phosphoprotein              247     119      33    0.260    127     
mmu:67050 NFKB activating protein                                   415     119      33    0.248    161     
mmu:67154 metadherin                                                579     119      33    0.318    85      
mmu:326622 UPF2 regulator of nonsense transcripts homol  K14327    1269     118      33    0.348    89      
mmu:331474 retrotransposon gag domain containing 4                  599     118      33    0.292    130     
mmu:17932 myelin transcription factor 1                            1169     117      33    0.266    109     
mmu:238247 AT rich interactive domain 4A (RBP1-like)               1261     117      33    0.236    233     
mmu:269610 chromodomain helicase DNA binding protein 5   K14435    1952     117      33    0.258    128     
mmu:66471 acidic (leucine-rich) nuclear phosphoprotein              248     117      33    0.293    116     
mmu:67039 RNA binding motif protein 25                   K12822     838     117      33    0.248    133     
mmu:76130 LAS1-like (S. cerevisiae)                      K16912     759     117      33    0.313    83      
mmu:76757 triadin                                                   693     117      33    0.333    99      
mmu:102633866 trichohyalin-like                                     446     116      32    0.264    87      
mmu:11776 adaptor-related protein complex 3, delta 1 su  K12396    1199     116      32    0.284    95      
mmu:331401 THO complex 2                                 K12879    1594     116      32    0.285    144     
mmu:105782 scribbled homolog (Drosophila)                K16175    1665     115      32    0.282    124     
mmu:12652 chromogranin A                                            463     115      32    0.225    267     
mmu:12788 cyclic nucleotide gated channel alpha 1        K04948     684     115      32    0.438    64      
mmu:235180 fasciculation and elongation protein zeta 1              392     115      32    0.288    163     
mmu:68146 ADP-ribosylation factor-like 13B               K07962     427     115      32    0.253    91      
mmu:74914 cylicin, basic protein of sperm head cytoskel             422     115      32    0.282    103     
mmu:102642810 ubiquitin carboxyl-terminal hydrolase 35-             682     114      32    0.330    100     
mmu:108071 glutamate receptor, metabotropic 5            K04604    1171     114      32    0.200    185     
mmu:19765 ralA binding protein 1                         K08773     648     114      32    0.288    104     
mmu:22589 alpha thalassemia/mental retardation syndrome  K10779    2476     114      32    0.254    126     
mmu:235497 Leo1, Paf1/RNA polymerase II complex compone  K15177     667     114      32    0.252    107     
mmu:244144 ubiquitin specific peptidase 35               K11854    1009     114      32    0.330    100     
mmu:66707 NFKB activating protein-like                              395     114      32    0.279    136     
mmu:67500 cell division cycle and apoptosis regulator 1            1146     114      32    0.222    153     
mmu:233164 predicted gene 4884                                      694     113      32    0.211    166     
mmu:594844 transcription elongation factor A (SII)-like             200     113      32    0.303    99      
mmu:67628 acidic (leucine-rich) nuclear phosphoprotein              272     113      32    0.357    84      
mmu:69276 SEC62 homolog (S. cerevisiae)                  K12275     398     113      32    0.471    51      
mmu:80985 tripartite motif-containing 44                 K12020     345     113      32    0.263    118     
mmu:94246 AT rich interactive domain 4B (RBP1-like)                1314     113      32    0.205    215     
mmu:17755 microtubule-associated protein 1B              K10429    2464     112      31    0.270    141     
mmu:226982 eukaryotic translation initiation factor 5B   K03243    1216     112      31    0.302    129     
mmu:381522 RIKEN cDNA E230008N13 gene                              1664     112      31    0.304    102     
mmu:67382 bromodomain containing 3                       K11721     726     112      31    0.265    151     
mmu:100504173 predicted gene 15466                                  111     111      31    0.298    124     
mmu:102632767 trichohyalin-like                                     634     111      31    0.245    98      
mmu:106763 tau tubulin kinase 1 (EC:2.7.11.1)            K08815    1308     111      31    0.241    108     
mmu:171504 apolipoprotein B receptor                                942     111      31    0.217    166     
mmu:19285 polymerase I and transcript release factor                392     111      31    0.280    132     
mmu:209361 TAF3 RNA polymerase II, TATA box binding pro  K14650     932     111      31    0.328    64      
mmu:215445 RAB11 family interacting protein 3 (class II  K12485    1047     111      31    0.255    145     
mmu:320790 chromodomain helicase DNA binding protein 7   K14437    2986     111      31    0.255    149     
mmu:380684 neurofilament, heavy polypeptide              K04574    1090     111      31    0.296    125     
mmu:57261 bromodomain containing 4 (EC:3.1.1.31)         K11722    1401     111      31    0.258    155     
mmu:58206 zinc finger and BTB domain containing 32       K10506     465     111      31    0.270    137     
mmu:71148 mesoderm induction early response 1 homolog (             511     111      31    0.248    121     
mmu:72275 RIKEN cDNA 2200002D01 gene                                114     111      31    0.361    72      
mmu:74322 CXXC finger 1 (PHD domain)                     K14960     660     111      31    0.230    165     
mmu:76014 zinc finger CCCH-type containing 18            K13092     972     111      31    0.274    117     
mmu:98415 nuclear casein kinase and cyclin-dependent ki             233     111      31    0.336    107     
mmu:102643093 nucleophosmin-like                                    292     110      31    0.317    104     
mmu:16564 kinesin family member 21A                      K10395    1672     110      31    0.240    254     
mmu:18148 nucleophosmin 1                                K11276     279     110      31    0.317    104     
mmu:212483 family with sequence similarity 193, member              778     110      31    0.261    142     
mmu:407823 bromodomain adjacent to zinc finger domain,             2123     110      31    0.284    81      
mmu:54561 nucleosome assembly protein 1-like 3           K11281     544     110      31    0.309    94      
mmu:64934 pescadillo homolog 1, containing BRCT domain   K14843     584     110      31    0.286    126     
mmu:66104 transcription elongation factor A (SII)-like              200     110      31    0.286    98      
mmu:68152 family with sequence similarity 133, member B             245     110      31    0.308    78      
mmu:75273 proline, glutamic acid and leucine rich prote  K16913    1123     110      31    0.330    97      
mmu:67471 G patch domain containing 1                    K13123     930     109      31    0.286    84      
mmu:68134 UPF3 regulator of nonsense transcripts homolo  K14328     472     109      31    0.240    179     
mmu:19231 prothymosin alpha                              K13784     111     108      30    0.288    118     
mmu:20190 ryanodine receptor 1, skeletal muscle          K04961    5035     108      30    0.385    65      
mmu:212670 cation channel, sperm associated 2            K16890     588     108      30    0.243    136     
mmu:218543 splicing regulatory glutamine/lysine-rich pr  K13165     494     108      30    0.219    169     
mmu:228911 teashirt zinc finger family member 2          K09236    1030     108      30    0.243    173     
mmu:72459 HIV TAT specific factor 1                      K13093     757     108      30    0.301    103     
mmu:102638226 protein FAM133B-like                                  146     107      30    0.295    78      
mmu:102638291 uncharacterized LOC102638291                           65     107      30    0.458    48      
mmu:170822 ubiquitin specific peptidase 33 (EC:3.4.19.1  K11848     897     107      30    0.214    192     
mmu:20899 stimulated by retinoic acid gene 8                        393     107      30    0.287    129     
mmu:212880 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 (E  K12811    1032     107      30    0.329    76      
mmu:227331 GRB10 interacting GYF protein 2                         1285     107      30    0.236    220     
mmu:26420 mitogen-activated protein kinase 9 (EC:2.7.11  K04440     423     107      30    0.210    238     
mmu:27221 chromatin assembly factor 1, subunit A (p150)  K10750     911     107      30    0.263    137     
mmu:59001 polymerase (DNA directed), epsilon 3 (p17 sub  K02326     145     107      30    0.333    81      
mmu:66717 coiled-coil domain containing 96                          584     107      30    0.259    108     
mmu:73124 golgi integral membrane protein 4                         655     107      30    0.262    122     
mmu:77087 ankyrin repeat domain 11                                 2643     107      30    0.301    93      
mmu:100039269 predicted gene 2128                                   858     106      30    0.224    170     
mmu:109331 ring finger protein 20                        K10696     973     106      30    0.262    141     
mmu:17356 myeloid/lymphoid or mixed-lineage leukemia (t  K05702    1820     106      30    0.209    158     
mmu:22138 titin (EC:2.7.11.1)                            K12567   33467     106      30    0.283    127     
mmu:230596 PRP38 pre-mRNA processing factor 38 (yeast)   K12849     312     106      30    0.212    189     
mmu:56215 apoptotic chromatin condensation inducer 1     K12875     581     106      30    0.220    109     
mmu:67896 coiled-coil domain containing 80                          949     106      30    0.250    88      
mmu:68070 PDZ domain containing 2                                  2796     106      30    0.235    149     
mmu:68810 nexilin                                                   607     106      30    0.267    101     
mmu:69207 serine/arginine-rich splicing factor 11        K12899     511     106      30    0.275    102     
mmu:70093 ubiquitin-conjugating enzyme E2Q (putative) 1  K10582     422     106      30    0.306    98      
mmu:100034361 microfibrillar-associated protein 1B       K13110     439     105      30    0.269    145     
mmu:102632285 WD repeat-containing protein 87-like                 1602     105      30    0.304    125     
mmu:105246 bromodomain containing 9                      K11723     597     105      30    0.391    46      
mmu:14211 structural maintenance of chromosomes 2        K06674    1191     105      30    0.284    155     
mmu:15464 histidine rich calcium binding protein                    738     105      30    0.295    95      
mmu:207165 bromodomain PHD finger transcription factor   K11728    2921     105      30    0.274    113     
mmu:231045 RIKEN cDNA 4931409K22 gene                               825     105      30    0.253    146     
mmu:244349 K(lysine) acetyltransferase 6A (EC:2.3.1.48)  K11305    2003     105      30    0.231    147     
mmu:26992 bromodomain containing 7                       K11723     651     105      30    0.214    154     
mmu:67288 splicing regulatory glutamine/lysine-rich pro             153     105      30    0.264    91      
mmu:67532 microfibrillar-associated protein 1A           K13110     439     105      30    0.269    145     
mmu:71713 cell division cycle 40                         K12816     579     105      30    0.238    181     
mmu:83397 A kinase (PRKA) anchor protein (gravin) 12     K16528    1684     105      30    0.241    137     
mmu:110052 DEK oncogene (DNA binding)                    K17046     380     104      30    0.280    125     
mmu:11775 adaptor-related protein complex 3, beta 2 sub  K12397    1082     104      30    0.268    127     
mmu:14595 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransf  K07966     399     104      30    0.238    147     
mmu:208846 dishevelled associated activator of morphoge  K04512    1068     104      30    0.232    168     
mmu:21417 zinc finger E-box binding homeobox 1           K09299    1117     104      30    0.287    101     
mmu:54324 Rho guanine nucleotide exchange factor (GEF)             1581     104      30    0.287    115     
mmu:56347 eukaryotic translation initiation factor 3, s  K03252     911     104      30    0.322    87      
mmu:57896 lysine-rich coiled-coil 1                                 256     104      30    0.250    168     
mmu:72345 APC membrane recruitment 1                               1132     104      30    0.219    329     
mmu:74048 RIKEN cDNA 4632428N05 gene                                308     104      30    0.267    150     
mmu:74437 RIKEN cDNA 4933402E13 gene                                429     104      30    0.354    82      
mmu:77945 retinitis pigmentosa GTPase regulator interac  K16512    1127     104      30    0.276    105     
mmu:11906 zinc finger homeobox 3                         K09378    3723     103      29    0.321    56      
mmu:13163 Fas death domain-associated protein            K02308     740     103      29    0.252    127     
mmu:20588 SWI/SNF related, matrix associated, actin dep  K11649    1104     103      29    0.273    99      
mmu:21957 troponin T3, skeletal, fast                    K12046     272     103      29    0.220    132     
mmu:225288 formin homology 2 domain containing 3                   1578     103      29    0.262    103     
mmu:226562 proline-rich coiled-coil 2C                             2846     103      29    0.203    158     
mmu:228005 peptidyl-prolyl isomerase G (cyclophilin G)   K09566     752     103      29    0.220    123     
mmu:383435 membrane-spanning 4-domains, subfamily A, me            1232     103      29    0.252    123     
mmu:56226 espin                                                     253     103      29    0.248    113     
mmu:66923 polybromo 1                                    K11757    1704     103      29    0.267    131     
mmu:75725 PHD finger protein 14                                     941     103      29    0.323    96      
mmu:78283 MAP7 domain containing 2                                  781     103      29    0.222    198     
mmu:83701 serrate RNA effector molecule homolog (Arabid             868     103      29    0.292    113     
mmu:98053 general transcription factor IIF, polypeptide  K03138     508     103      29    0.241    145     
mmu:100042165 cDNA sequence BC005561                               1589     102      29    0.264    110     
mmu:107373 family with sequence similarity 111, member              613     102      29    0.216    236     
mmu:13406 dentin matrix protein 1                                   503     102      29    0.280    93      
mmu:22184 zinc finger (CCCH type), RNA binding motif an             541     102      29    0.239    109     
mmu:319885 zinc finger, CCHC domain containing 7         K12597     541     102      29    0.231    216     
mmu:67486 polymerase (RNA) III (DNA directed) polypepti  K03024     223     102      29    0.238    147     
mmu:73473 IWS1 homolog (S. cerevisiae)                   K17498     766     102      29    0.257    105     
mmu:75732 IQ motif containing D                                     458     102      29    0.281    139     
mmu:102637108 splicing regulatory glutamine/lysine-rich             158     101      29    0.333    48      
mmu:110147 euchromatic histone lysine N-methyltransfera  K11420    1229     101      29    0.271    85      
mmu:116848 bromodomain adjacent to zinc finger domain,   K15224    1887     101      29    0.230    126     
mmu:215193 digestive organ expansion factor homolog (ze  K14774     768     101      29    0.318    88      
mmu:22634 pleiomorphic adenoma gene-like 1                          704     101      29    0.270    137     
mmu:240069 microrchidia 2B                                         1022     101      29    0.236    106     
mmu:380664 LEM domain containing 3                                  918     101      29    0.293    82      
mmu:665775 biorientation of chromosomes in cell divisio            3032     101      29    0.267    90      
mmu:66580 ESF1, nucleolar pre-rRNA processing protein,              845     101      29    0.328    58      
mmu:66763 RIKEN cDNA 4933425L06 gene                     K01081     585     101      29    0.240    246     
mmu:72895 SET domain containing 5                                  1441     101      29    0.212    85      
mmu:74362 sperm associated antigen 17                              2320     101      29    0.352    54      
mmu:12607 CCAAT/enhancer binding protein zeta            K14832    1052     100      29    0.356    59      
mmu:14208 protein phosphatase 1G (formerly 2C), magnesi  K17499     542     100      29    0.283    99      
mmu:15193 hepatoma-derived growth factor, related prote             669     100      29    0.330    88      
mmu:19687 replication factor C (activator 1) 1           K10754    1131     100      29    0.248    157     
mmu:209086 sterile alpha motif domain containing 9-like            1579     100      29    0.272    103     
mmu:213582 microtubule-associated protein 9              K10434     646     100      29    0.313    147     
mmu:216848 chromodomain helicase DNA binding protein 3   K11642    2055     100      29    0.284    95      
mmu:22083 Ctr9, Paf1/RNA polymerase II complex componen  K15176    1173     100      29    0.289    76      
mmu:26921 mitogen-activated protein kinase kinase kinas  K04407    1288     100      29    0.259    81      
mmu:633979 adenylate kinase 9                                      1879     100      29    0.327    101     
mmu:67302 zinc finger CCCH type containing 13                      1729     100      29    0.263    95      
mmu:69389 H2B histone family, member M                   K11252     224     100      29    0.413    63      
mmu:75416 NOP14 nucleolar protein                        K14766     860     100      29    0.216    162     
mmu:99681 trichohyalin                                             1599     100      29    0.200    140     

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