SSDB Paralog Search Result

KEGG ID :mmx:MmarC6_0534 (394 a.a.)
Definition:ATP dependent DNA ligase; K07468 putative ATP-dependent DNA ligase
Update status:T00615 (abra,amj,apal,bacu,bbrc,bbre,bbrj,bbrn,bbrs,bbrv,bcom,bor,bpg,bpsm,bsc,btj,btq,btz,bze,cmk,cmt,cten,cthr,dav,ecoh,ela,hlr,lmow,lve,maj,maw,mbe,npa,oas,paec,paev,pbi,pes,pfj,pper,pvu,saui,spaa,tmn,vph,xfu : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 12 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
mmx:MmarC6_0213 hypothetical protein                                409     109      31    0.232    284     
mmx:MmarC6_1667 hypothetical protein                     K09718     525     109      31    0.195    405     
mmx:MmarC6_1706 tRNA CCA-pyrophosphorylase (EC:2.7.7.21  K07558     459     109      31    0.242    360     
mmx:MmarC6_0409 hypothetical protein                     K07133     423     108      30    0.211    388     
mmx:MmarC6_1018 hypothetical protein                               1022     107      30    0.217    401     
mmx:MmarC6_0382 formylmethanofuran dehydrogenase subuni  K00200     583     105      30    0.250    144     
mmx:MmarC6_1332 SMC domain-containing protein            K03546     993     105      30    0.228    359     
mmx:MmarC6_1389 hypothetical protein                     K06986     266     105      30    0.248    133     
mmx:MmarC6_0598 hypothetical protein                                611     103      29    0.212    391     
mmx:MmarC6_0270 xylose isomerase domain-containing prot             269     102      29    0.244    201     
mmx:MmarC6_1787 hypothetical protein                                543     102      29    0.235    238     
mmx:MmarC6_1155 phosphate uptake regulator PhoU          K02039     377     100      29    0.229    271     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]