SSDB Paralog Search Result

KEGG ID :mrh:MycrhN_3288 (773 a.a.)
Definition:DNA ligase D/DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD
Update status:T01685 (aaus,agw,arg,bacl,bgo,bgu,bmeg,bmel,fil,fiy,lis,mavu,mbac,mbw,mby,mef,mek,meq,metm,mls,paly,pck,pfre,pih,pko,pox,pri,reb,rmc,sals,shh,sns,sphi,srd,syb,vba,vcf,vcx,vcz,xbv,ypf,ypo : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 12 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
mrh:MycrhN_1435 putative DNA primase                                411     510     122    0.285    418     
mrh:MycrhN_2050 DNA polymerase LigD, polymerase domain-             348     478     115    0.306    330     
mrh:MycrhN_2046 ATP-dependent DNA ligase                            357     369      90    0.312    346     
mrh:MycrhN_2898 ATP-dependent DNA ligase                            357     364      89    0.312    346     
mrh:MycrhN_3374 putative DNA primase                                317     351      86    0.316    263     
mrh:MycrhN_2032 ATP-dependent DNA ligase                            359     350      86    0.306    340     
mrh:MycrhN_6018 ATP-dependent DNA ligase I               K10747     515     306      76    0.253    514     
mrh:MycrhN_2049 ATP dependent DNA ligase-like protein,A             386     277      69    0.278    356     
mrh:MycrhN_5564 sigma-70 family RNA polymerase sigma fa  K03086     528     113      32    0.300    140     
mrh:MycrhN_4245 hypothetical protein                                358     103      29    0.312    112     
mrh:MycrhN_0714 NAD(P)H-nitrite reductase                           391     101      29    0.333    72      
mrh:MycrhN_2829 methylase involved in ubiquinone/menaqu             198     101      29    0.302    86      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]