SSDB Paralog Search Result

KEGG ID :mrh:MycrhN_3288 (773 a.a.)
Definition:DNA ligase D/DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD
Update status:T01685 (agl,aoa,asq,avu,bcig,bgy,bhu,boe,btho,caby,hhsr,hsi,jaz,jeu,kba,mbf,myz,pmuc,suam,vhl,xho : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Threshold:
  

Search Result : 12 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
mrh:MycrhN_1435 putative DNA primase                               411      510 (    -)     122    0.285    418      -> 
mrh:MycrhN_2050 DNA polymerase LigD, polymerase domain             348      478 (    -)     115    0.306    330      -> 
mrh:MycrhN_2046 ATP-dependent DNA ligase                           357      369 (    -)      90    0.312    346      -> 
mrh:MycrhN_2898 ATP-dependent DNA ligase                           357      364 (    -)      89    0.312    346      -> 
mrh:MycrhN_3374 putative DNA primase                               317      351 (    -)      86    0.316    263      -> 
mrh:MycrhN_2032 ATP-dependent DNA ligase                           359      350 (    -)      86    0.306    340      -> 
mrh:MycrhN_6018 ATP-dependent DNA ligase I              K10747     515      306 (    -)      76    0.253    514      -> 
mrh:MycrhN_2049 ATP dependent DNA ligase-like protein,A            386      277 (    -)      69    0.278    356      -> 
mrh:MycrhN_5564 RNA polymerase sigma factor, sigma-70 f K03086     528      113 (    -)      32    0.300    140      -> 
mrh:MycrhN_4245 hypothetical protein                               358      103 (    -)      29    0.312    112      -> 
mrh:MycrhN_0714 NAD(P)H-nitrite reductase                          391      101 (    -)      29    0.333    72       -> 
mrh:MycrhN_2829 methylase involved in ubiquinone/menaqu            198      101 (    -)      29    0.302    86       -> 

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]