SSDB Paralog Search Result

KEGG ID :msa:Mycsm_03038 (295 a.a.)
Definition:DNA polymerase LigD, polymerase domain protein; K01971 DNA ligase (ATP)
Update status:T02423 (aah,abp,abv,adl,ahd,ahp,ahr,bamt,bans,ble,bmet,bor,bpsd,bpsm,bpum,bsc,bsf,ccf,ccoi,ccy,cjer,clt,cmn,cmo,cput,ctec,ctfw,dav,dsq,echj,echl,echs,ecoh,elv,fme,gbc,gbs,gtr,hcs,hct,hlr,hpyb,jag,koy,kpa,kps,lfp,lmoq,lmox,lmr,mdm,mlr,mrr,mtq,mtut,mtuu,ngl,npa,nvn,oas,paei,paeo,patr,pbc,pch,pco,pes,pfp,pmum,ppac,ppq,psq,rbc,rla,rpj,rus,sagp,sauj,sauk,sauq,saut,sauv,sauw,saux,sauy,shs,sla,ssuy,tms,tpas,wse,yel,zmr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 8 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
msa:Mycsm_05316 DNA ligase D/DNA polymerase LigD         K01971     761     547     131    0.330    282     
msa:Mycsm_00255 DNA polymerase LigD, polymerase domain              318     536     128    0.351    308     
msa:Mycsm_00265 putative DNA primase                                411     513     123    0.352    287     
msa:Mycsm_06080 DNA polymerase LigD, polymerase domain   K01971     350     483     116    0.339    295     
msa:Mycsm_04548 Diacylglycerol O-acyltransferase (EC:2.             476     126      35    0.265    219     
msa:Mycsm_03728 superfamily II RNA helicase              K03727     914     112      31    0.287    171     
msa:Mycsm_02755 hypothetical protein                                548     110      31    0.259    205     
msa:Mycsm_03826 sulfite reductase, alpha subunit (flavo            1355     100      29    0.237    207     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]