SSDB Paralog Search Result

KEGG ID :msa:Mycsm_03038 (295 a.a.)
Definition:DNA polymerase LigD, polymerase domain protein; K01971 DNA ligase (ATP)
Update status:T02423 (abq,badl,baft,bcar,bcas,bced,bcen,bcib,bdh,bdo,bgs,bhs,bmk,bok,bpv,bsz,bxb,caj,cjc,clh,cnt,coa,dok,eaa,eft,fpc,fpo,fpy,hpak,hpas,hro,kok,lgi,mbj,mbq,mjh,mor,nle,oah,ori,pato,pda,pdu,pge,pmos,prc,psx,rat,rei,sbv,sepp,sequ,sfn,sht,sio,siq,stv,sxl,tpk,umr,vvl,wci,wct,ypq : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 8 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
msa:Mycsm_05316 DNA ligase D/DNA polymerase LigD         K01971     761     547     131    0.330    282     
msa:Mycsm_00255 DNA polymerase LigD, polymerase domain              318     536     128    0.351    308     
msa:Mycsm_00265 putative DNA primase                                411     513     123    0.352    287     
msa:Mycsm_06080 DNA polymerase LigD, polymerase domain   K01971     350     483     116    0.339    295     
msa:Mycsm_04548 Diacylglycerol O-acyltransferase (EC:2.             476     126      35    0.265    219     
msa:Mycsm_03728 superfamily II RNA helicase              K03727     914     112      31    0.287    171     
msa:Mycsm_02755 hypothetical protein                                548     110      31    0.259    205     
msa:Mycsm_03826 sulfite reductase, alpha subunit (flavo            1355     100      29    0.237    207     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]