SSDB Paralog Search Result

KEGG ID :msa:Mycsm_06080 (350 a.a.)
Definition:DNA polymerase LigD, polymerase domain protein; K01971 DNA ligase (ATP)
Update status:T02423 (abq,badl,baft,bcar,bced,bcib,bdh,bdo,bgs,bmk,bok,bpv,bsz,bxb,caj,cjc,clh,cnt,coa,dok,eaa,eft,fpc,fpo,fpy,hpas,hro,kok,lgi,mbj,mbq,mjh,mor,nle,oah,ori,pato,pda,pdu,pge,pmos,prc,psx,rat,sbv,sepp,sfn,sht,sio,siq,stv,tpk,umr,vvl,wci,wct : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 8 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
msa:Mycsm_00265 putative DNA primase                                411     958     224    0.463    339     
msa:Mycsm_03038 DNA polymerase LigD, polymerase domain   K01971     295     483     116    0.339    295     
msa:Mycsm_00255 DNA polymerase LigD, polymerase domain              318     455     110    0.351    288     
msa:Mycsm_05316 DNA ligase D/DNA polymerase LigD         K01971     761     449     108    0.294    333     
msa:Mycsm_05892 DNA repair protein RadA                  K04485     456     113      32    0.256    180     
msa:Mycsm_07214 hypothetical protein                                659     107      30    0.258    248     
msa:Mycsm_02579 phenazine biosynthesis protein PhzF fam             228     102      29    0.291    141     
msa:Mycsm_07315 hypothetical protein                                214     100      29    0.320    97      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]