SSDB Paralog Search Result

KEGG ID :msp:Mspyr1_55390 (328 a.a.)
Definition:DNA polymerase LigD-like ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD
Update status:T01376 (aaus,agw,arg,bacl,bgo,bgu,bmeg,bmel,fil,fiy,lis,mavu,mbac,mbw,mby,mef,mek,meq,metm,mls,paly,pck,pfre,pih,pko,pox,pri,reb,rmc,sals,shh,sns,sphi,srd,syb,vba,vcf,vcx,vcz,xbv,ypf,ypo : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 6 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
msp:Mspyr1_12280 DNA ligase D/DNA polymerase LigD        K01971     766     543     130    0.365    310     
msp:Mspyr1_49270 ATP-dependent DNA ligase                           366     336      82    0.317    341     
msp:Mspyr1_49100 ATP-dependent DNA ligase                           351     308      76    0.296    335     
msp:Mspyr1_36660 ATP-dependent DNA ligase I              K10747     511     262      66    0.274    296     
msp:Mspyr1_12780 hypothetical protein                               193     116      32    0.303    119     
msp:Mspyr1_15270 virulence factor Mce family protein     K02067     488     105      30    0.309    136     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]