SSDB Paralog Search Result

KEGG ID :mtr:MTR_4g055080 (430 a.a.)
Definition:histone deacetylase family protein; K06067 histone deacetylase 1/2
Update status:T01716 (aak,alm,bbau,beb,bly,boe,bon,brad,btrm,cif,csp,ctyk,dpu,gsr,haa,hbc,maad,mbl,mcw,mema,mip,moi,mup,palc,pali,pcm,pdm,rfa,rud,sphg,spsy,vaa,zal : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 11 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
mtr:MTR_3g118535 histone deacetylase family protein      K06067     498    1753     405    0.589    411     
mtr:MTR_5g004640 histone deacetylase family protein      K06067     495    1736     402    0.601    401     
mtr:MTR_3g077160 histone deacetylase family protein      K06067     476    1670     387    0.552    431     
mtr:MTR_3g077120 histone deacetylase superfamily protei  K06067     192     678     160    0.567    164     
mtr:MTR_2g087270 histone deacetylase superfamily protei             386     385      94    0.289    304     
mtr:MTR_4g109500 histone deacetylase superfamily protei  K11407     650     362      88    0.238    442     
mtr:MTR_4g111985 histone deacetylase superfamily protei  K11407     599     356      87    0.261    353     
mtr:MTR_1g016440 histone deacetylase superfamily protei  K11418     350     311      77    0.277    311     
mtr:MTR_8g093800 histone deacetylase superfamily protei             420     284      71    0.282    216     
mtr:MTR_1g032720 RNA-directed RNA polymerase             K11699    1726     110      31    0.353    102     
mtr:MTR_2g461540 hypothetical protein                                96     101      29    0.357    56      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]