SSDB Paralog Search Result

KEGG ID :mtr:MTR_6g018300 (177 a.a.)
Definition:Ribulose bisphosphate carboxylase small chain; K01602 ribulose-bisphosphate carboxylase small chain
Update status:T01716 (arm,babb,babt,babu,banm,banv,bcew,bka,bmae,bmaq,bpsa,bpso,bsus,bthi,bww,cpse,cpsf,cpsu,ecle,ecln,ero,fpu,hih,hir,kpg,kpv,kpw,kpy,llj,lmok,lmom,lmv,mabo,nte,pacn,pant,psoj,saud,sauf,seni,spyo,thq,thz,tot,vct,vda,wic : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 10 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
mtr:MTR_6g018310 Ribulose bisphosphate carboxylase smal  K01602     180    1136     265    0.956    180     
mtr:MTR_065s0049 Ribulose bisphosphate carboxylase smal  K01602     181     998     233    0.827    179     
mtr:MTR_3g057130 Ribulose bisphosphate carboxylase smal  K01602     181     998     233    0.832    179     
mtr:MTR_4g127870 Ribulose bisphosphate carboxylase smal  K01602     173     604     144    0.506    164     
mtr:MTR_065s0041 Ribulose bisphosphate carboxylase smal  K01602     106     534     128    0.816    103     
mtr:MTR_103s0077 Ribulose bisphosphate carboxylase smal  K01602     106     532     127    0.816    103     
mtr:MTR_065s0004 Ribulose bisphosphate carboxylase smal             613     530     127    0.796    103     
mtr:MTR_065s0035 Ribulose bisphosphate carboxylase smal             175     528     126    0.806    103     
mtr:MTR_3g057010 Ribulose bisphosphate carboxylase smal  K15095     356     465     112    0.867    75      
mtr:MTR_3g057150 Ribulose bisphosphate carboxylase smal              91     341      84    0.678    87      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]