SSDB Paralog Search Result

KEGG ID :mtr:MTR_7g021770 (475 a.a.)
Definition:Ribulose bisphosphate carboxylase large chain; K01601 ribulose-bisphosphate carboxylase large chain
Update status:T01716 (abra,amj,apal,bacu,bbrc,bbre,bbrj,bbrn,bbrs,bbrv,bcom,bor,bpg,bpsm,bsc,btj,btq,btz,bze,cmk,cmt,cten,cthr,dav,ecoh,ela,hlr,lmow,lve,maj,maw,mbe,npa,oas,paec,paev,pbi,pes,pfj,pper,pvu,saui,spaa,tmn,vph,xfu : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 15 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
mtr:MetrCp074 ribulose-1,5-bisphosphate carboxylase/oxy  K01601     475    3213     738    0.996    475     
mtr:MTR_7g117930 Ribulose bisphosphate carboxylase larg  K01601     475    3202     736    0.992    475     
mtr:MTR_6g055010 Ribulose bisphosphate carboxylase larg  K01601     475    3180     731    0.989    475     
mtr:MTR_4g051270 Ribulose bisphosphate carboxylase larg  K01601     456    3033     697    0.956    475     
mtr:MTR_3g035490 Ribulose bisphosphate carboxylase larg  K01601     268    1341     312    0.961    207     
mtr:MTR_3g035680 Ribulose bisphosphate carboxylase larg  K01601     177    1077     251    0.969    163     
mtr:MTR_5g075460 Ribulose bisphosphate carboxylase larg  K01601     230     613     146    0.639    166     
mtr:MTR_5g087240 Defensin-like protein                   K08864     671     391      95    0.909    66      
mtr:MTR_5g009680 Ribulose bisphosphate carboxylase larg              55     337      83    0.980    49      
mtr:MTR_4g076920 Ribulose bisphosphate carboxylase larg             224     259      65    0.907    43      
mtr:MTR_7g084780 Ribulose bisphosphate carboxylase larg              69     186      48    0.848    33      
mtr:MTR_3g049410 Tryptophan synthase beta chain          K01696     466     119      33    0.240    233     
mtr:MTR_3g057170 Cytochrome P450                                    380     110      31    0.240    150     
mtr:MTR_024s0012 Cytochrome P450                                    535     104      30    0.236    148     
mtr:MTR_3g051120 Tryptophan synthase beta chain          K01696     412     102      29    0.259    189     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]