SSDB Paralog Search Result

KEGG ID :mtu:Rv3062 (507 a.a.)
Definition:Probable ATP-dependent DNA ligase LigB (polydeoxyribonucleotide synthase [ATP]) (polynucleotide ligase [ATP]) (sealase) (DNA repair protein) (DNA joinase); K01971 DNA ligase (ATP)
Update status:T00015 (amim,atr,bapf,bapg,bapu,bapw,bpsm,btra,btre,btrh,cmy,dav,ecoh,ecoo,hlr,myd,obr,pale,pes,psyr,ptg,rlb,rlu,slr,smir,sod,tcc,ths,tre : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 72 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
mtu:Rv0938 ATP dependent DNA ligase LigD (ATP dependent  K01971     759     306      76    0.290    324     
mtu:Rv3731 Possible ATP-dependent DNA ligase LigC (poly  K01971     358     268      67    0.303    356     
mtu:Rv2501c Probable acetyl-/propionyl-coenzyme A carbo  K11263     654     135      37    0.241    345     
mtu:Rv1165 Possible GTP-binding translation elongation   K06207     628     126      35    0.263    259     
mtu:Rv3411c Probable inosine-5'-monophosphate dehydroge  K00088     529     124      34    0.246    345     
mtu:Rv0509 Probable glutamyl-tRNA reductase HemA (GLUTR  K02492     468     121      33    0.266    372     
mtu:Rv2932 Phenolpthiocerol synthesis type-I polyketide  K12441    1538     120      33    0.324    139     
mtu:Rv2159c hypothetical protein                                    344     118      33    0.292    332     
mtu:Rv0266c Probable 5-oxoprolinase OplA (5-oxo-L-proli  K01469    1209     116      32    0.303    119     
mtu:Rv3202c Possible ATP-dependent DNA helicase          K01529    1055     115      32    0.258    279     
mtu:Rv3308 Probable phosphomannomutase PmmB (phosphoman  K01840     534     115      32    0.247    292     
mtu:Rv0107c Probable cation-transporter ATPase I CtpI    K12955    1632     113      32    0.266    455     
mtu:Rv1918c PPE family protein PPE35                                987     113      32    0.254    193     
mtu:Rv2048c Polyketide synthase Pks12                    K12436    4151     112      31    0.244    532     
mtu:Rv0860 Probable fatty oxidation protein FadB         K01782     720     111      31    0.224    263     
mtu:Rv3627c hypothetical protein                         K07259     461     111      31    0.252    412     
mtu:Rv0290 ESX conserved component EccD3 ESX-3 type VII             472     110      31    0.295    173     
mtu:Rv0747 PE-PGRS family protein PE_PGRS10                         801     110      31    0.322    115     
mtu:Rv1469 Probable cation transporter P-type ATPase D   K12951     657     110      31    0.272    169     
mtu:Rv1809 PPE family protein PPE33                                 468     110      31    0.273    139     
mtu:Rv2191 hypothetical protein                          K02342     645     110      31    0.251    267     
mtu:Rv2326c Possible transmembrane ATP-binding protein   K16786..   697     110      31    0.260    335     
mtu:Rv3530c Possible oxidoreductase                                 260     110      31    0.278    162     
mtu:Rv3764c Possible two component sensor kinase TcrY    K02484     475     110      31    0.250    456     
mtu:Rv0435c Putative conserved ATPase                    K13525     728     109      31    0.264    239     
mtu:Rv2352c PPE family protein PPE38                                391     109      31    0.278    212     
mtu:Rv3734c Putative triacylglycerol synthase (diacylgl             454     109      31    0.242    252     
mtu:Rv3878 ESX-1 secretion-associated protein EspJ Cons             280     109      31    0.218    193     
mtu:Rv0197 Possible oxidoreductase                                  762     108      30    0.245    310     
mtu:Rv1204c hypothetical protein                                    562     108      30    0.261    218     
mtu:Rv2413c hypothetical protein                         K02340     316     108      30    0.287    178     
mtu:Rv0194 Probable transmembrane multidrug efflux pump  K06148    1194     107      30    0.237    431     
mtu:Rv1248c Multifunctional alpha-ketoglutarate metabol  K01616    1231     107      30    0.299    157     
mtu:Rv2064 Precorrin-3B synthase CobG                    K02229     363     107      30    0.263    217     
mtu:Rv2427c Probable gamma-glutamyl phosphate reductase  K00147     415     107      30    0.221    172     
mtu:Rv3879c ESX-1 secretion-associated protein EspK Ala             729     107      30    0.271    310     
mtu:Rv0202c Probable conserved transmembrane transport   K06994     966     106      30    0.236    326     
mtu:Rv0872c PE-PGRS family protein PE_PGRS15                        606     106      30    0.321    131     
mtu:Rv1193 Probable fatty-acid-CoA ligase FadD36 (fatty  K12429     473     106      30    0.259    313     
mtu:Rv2131c Monophosphatase CysQ                         K01082     267     106      30    0.263    175     
mtu:Rv0729 Possible D-xylulose kinase XylB (xylulokinas  K00854     448     105      30    0.291    213     
mtu:Rv0994 Probable molybdopterin biosynthesis protein   K03750     426     105      30    0.264    197     
mtu:Rv1018c Probable UDP-N-acetylglucosamine pyrophosph  K04042     495     105      30    0.236    339     
mtu:Rv1801 PPE family protein PPE29                                 423     105      30    0.276    214     
mtu:Rv3658c Probable conserved transmembrane protein     K12510     266     105      30    0.302    172     
mtu:Rv0631c Probable exonuclease V (gamma chain) RecC (  K03583    1097     104      30    0.264    246     
mtu:Rv0756c hypothetical protein                                    241     104      30    0.265    249     
mtu:Rv1807 PPE family protein PPE31                                 399     104      30    0.265    185     
mtu:Rv1937 Possible oxygenase                                       839     104      30    0.286    224     
mtu:Rv3015c hypothetical protein                                    337     104      30    0.276    163     
mtu:Rv0376c hypothetical protein                         K07402     380     103      29    0.264    254     
mtu:Rv0542c Possible O-succinylbenzoic acid--CoA ligase  K01911     362     103      29    0.271    354     
mtu:Rv1181 Probable polyketide beta-ketoacyl synthase P  K12432    1582     103      29    0.237    486     
mtu:Rv2922c Probable chromosome partition protein Smc    K03529    1205     103      29    0.244    348     
mtu:Rv3439c Conserved hypothetical alanine and proline              467     103      29    0.271    214     
mtu:Rv3573c Probable acyl-CoA dehydrogenase FadE34                  711     103      29    0.256    266     
mtu:Rv0969 Probable metal cation transporter P-type ATP  K12956     770     102      29    0.240    495     
mtu:Rv1251c hypothetical protein                         K06860    1139     102      29    0.254    323     
mtu:Rv1381 Probable dihydroorotase PyrC (DHOase)         K01465     430     102      29    0.258    229     
mtu:Rv2781c Possible alanine rich oxidoreductase         K00459     344     102      29    0.240    358     
mtu:Rv0530 hypothetical protein                                     405     101      29    0.281    242     
mtu:Rv1325c PE-PGRS family protein PE_PGRS24                        603     101      29    0.261    115     
mtu:Rv1661 Probable polyketide synthase Pks7             K12434    2126     101      29    0.247    308     
mtu:Rv2386c Isochorismate synthase MbtI                  K04781     450     101      29    0.218    431     
mtu:Rv1001 Probable arginine deiminase ArcA (adi) (ad)   K01478     402     100      29    0.261    353     
mtu:Rv1934c Probable acyl-CoA dehydrogenase FadE17       K00257     409     100      29    0.297    128     
mtu:Rv2150c Cell division protein FtsZ                   K03531     379     100      29    0.244    164     
mtu:Rv2157c Probable UDP-N-acetylmuramoylalanyl-D-gluta  K01929     510     100      29    0.272    202     
mtu:Rv2485c Probable carboxylesterase LipQ               K01175     421     100      29    0.284    141     
mtu:Rv3330 Probable penicillin-binding protein DacB1 (D  K07258     405     100      29    0.287    181     
mtu:Rv3712 Possible ligase                                          413     100      29    0.254    323     
mtu:Rv3823c Conserved integral membrane transport prote  K06994    1089     100      29    0.248    375     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]