SSDB Paralog Search Result

KEGG ID :nml:Namu_0128 (831 a.a.)
Definition:DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD
Update status:T00991 (abat,aoa,biu,bmay,bmec,boe,bpsl,bsem,bstg,bxi,cann,ccaj,ccan,cceu,cdip,cdk,cell,cfj,cfk,cman,csem,cser,cyi,eai,ecls,epz,fox,fvr,ghi,glz,keu,lvs,nai,ndv,nsd,nta,ocm,ome,opf,pazo,pcon,psco,pswu,pvr,rbb,rbp,rss,snw,strd,sulf,sure,synw,tci,tum,tvs,zju : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
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Search Result : 14 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
nml:Namu_0821 DNA primase small subunit                            360      410 (    -)      99    0.304    322      -> 
nml:Namu_0584 DNA polymerase LigD, polymerase domain pr            329      388 (    -)      94    0.296    280      -> 
nml:Namu_0553 DNA primase small subunit                            335      369 (    -)      90    0.341    270      -> 
nml:Namu_4586 DNA ligase I, ATP-dependent Dnl1          K10747     517      348 (    -)      85    0.315    327      -> 
nml:Namu_0826 ATP dependent DNA ligase                             354      328 (    -)      81    0.303    327      -> 
nml:Namu_0909 ABC transporter related                   K18230     563      137 (    -)      37    0.310    187      -> 
nml:Namu_0648 transcriptional regulator, GntR family wi K00375     453      120 (    -)      33    0.321    137      -> 
nml:Namu_3906 exodeoxyribonuclease V, alpha subunit     K03581     632      120 (    -)      33    0.329    158      -> 
nml:Namu_4156 methionyl-tRNA formyltransferase          K00604     307      109 (    -)      31    0.341    88       -> 
nml:Namu_0654 stress protein                                       289      105 (    -)      30    0.455    44       -> 
nml:Namu_4548 ATPase-like protein                                 1053      105 (    -)      30    0.341    85       -> 
nml:Namu_1521 hypothetical protein                                 297      103 (    -)      29    0.311    119      -> 
nml:Namu_2035 glycoside hydrolase family 3 domain prote K01207     490      102 (    -)      29    0.327    98       -> 
nml:Namu_3411 ABC transporter related                   K01990     342      102 (    -)      29    0.308    159      -> 

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