SSDB Paralog Search Result

KEGG ID :oca:OCAR_6912 (889 a.a.)
Definition:ATP-dependent DNA ligase; K01971 DNA ligase (ATP)
Update status:T00783 (acan,actn,ast,baci,btd,cpas,dfa,dgi,fve,hdt,hhm,hpyi,hpym,hpyr,hpyu,koe,lad,lff,loa,lph,lpo,lpr,mao,mro,mtuc,mtue,mtuh,nzs,pprc,sagl,sent,sfi,sly,soi,ssut,tmm,tpb : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 11 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
oca:OCAR_5172 DNA ligase                                 K01971     563     248      62    0.311    296     
oca:OCAR_5595 hypothetical protein                                  721     127      35    0.249    281     
oca:OCAR_4676 hypothetical protein                                  308     122      34    0.265    132     
oca:OCAR_6390 peptide chain release factor 3             K02837     570     115      32    0.242    165     
oca:OCAR_5088 peptidoglycan-binding domain 1                        712     113      32    0.241    203     
oca:OCAR_6758 bifunctional proline dehydrogenase/pyrrol  K13821    1234     110      31    0.234    393     
oca:OCAR_4418 chaperone protein DnaJ                     K03686     377     107      30    0.232    155     
oca:OCAR_5281 protease Do subfamily (EC:3.4.21.-)                   503     104      30    0.239    230     
oca:OCAR_7465 HtxB                                       K02044     292     104      30    0.244    172     
oca:OCAR_7378 long-chain-fatty-acid--CoA ligase (EC:6.2  K01897     561     101      29    0.215    195     
oca:OCAR_7291 protein TolA                               K03646     312     100      29    0.284    162     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]