SSDB Paralog Search Result

KEGG ID :oca:OCAR_6912 (889 a.a.)
Definition:ATP-dependent DNA ligase; K01971 DNA ligase (ATP)
Update status:T00783 (abp,abv,adl,bamt,bans,bor,bpsd,bpsm,bsc,ccf,ccoi,ccy,clt,cput,ctec,ctfw,dav,dsq,ecoh,fme,gbc,gbs,gtr,hlr,jag,lmoq,lmox,mlr,mrr,mtq,mtut,mtuu,npa,oas,paei,paeo,pco,pes,pfp,psq,rpj,rus,sauj,sauk,sauq,saut,sauv,sauw,saux,sauy,shs,sla,ssuy,tms,wse,zmr : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 11 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
oca:OCAR_5172 DNA ligase                                 K01971     563     248      62    0.311    296     
oca:OCAR_5595 hypothetical protein                                  721     127      35    0.249    281     
oca:OCAR_4676 hypothetical protein                                  308     122      34    0.265    132     
oca:OCAR_6390 peptide chain release factor 3             K02837     570     115      32    0.242    165     
oca:OCAR_5088 peptidoglycan-binding domain 1                        712     113      32    0.241    203     
oca:OCAR_6758 bifunctional proline dehydrogenase/pyrrol  K13821    1234     110      31    0.234    393     
oca:OCAR_4418 chaperone protein DnaJ                     K03686     377     107      30    0.232    155     
oca:OCAR_5281 protease Do subfamily (EC:3.4.21.-)                   503     104      30    0.239    230     
oca:OCAR_7465 HtxB                                       K02044     292     104      30    0.244    172     
oca:OCAR_7378 long-chain-fatty-acid--CoA ligase (EC:6.2  K01897     561     101      29    0.215    195     
oca:OCAR_7291 protein TolA                               K03646     312     100      29    0.284    162     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]