SSDB Paralog Search Result

KEGG ID :ote:Oter_4139 (345 a.a.)
Definition:ATP-dependent DNA ligase; K01971 DNA ligase (ATP)
Update status:T00689 (aso,ass,badl,baft,bcar,bcor,bdh,bdo,bgs,bmyc,bpv,bsz,btx,caj,caq,cii,cjc,cuv,eaa,eao,eft,ete,fpc,gst,kok,mbq,mcr,mjh,ngg,nle,oah,palk,rat,rbt,sbv,sfn,sht,sxy : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Sort by : SW-score SW-score by species KEGG-species
Search against:All organisms Selected organism group
Threshold:

Search Result : 13 hits

       Entry                                                 KO       len  SW-score  bits  identity overlap
-------------------------------------------------------------------  ----------------------------------------
ote:Oter_4309 DNA polymerase LigD ligase subunit         K01971     603     424     102    0.351    339     
ote:Oter_3148 ATP-dependent DNA ligase I (EC:6.5.1.1)    K07577    1017     327      80    0.312    352     
ote:Oter_3811 RND efflux system outer membrane lipoprot             476     130      35    0.257    369     
ote:Oter_4629 multi-sensor hybrid histidine kinase                  841     118      33    0.300    230     
ote:Oter_2319 ASPIC/UnbV domain-containing protein                 1192     112      31    0.278    180     
ote:Oter_3235 hypothetical protein                                  433     111      31    0.245    159     
ote:Oter_4481 conjugative relaxase domain-containing pr             907     108      30    0.314    191     
ote:Oter_2850 hypothetical protein                                  533     107      30    0.291    165     
ote:Oter_0325 von Willebrand factor type A                          859     106      30    0.251    175     
ote:Oter_0006 endonuclease/exonuclease/phosphatase                  499     104      30    0.277    188     
ote:Oter_0429 response regulator receiver modulated Che  K03412     361     102      29    0.307    163     
ote:Oter_0647 two component LuxR family transcriptional             225     102      29    0.301    153     
ote:Oter_0909 PAS/PAC sensor hybrid histidine kinase (E             876     100      29    0.234    235     

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]